Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AL4G01070
(Arabidopsis lyrata)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis lyrata | Orthologous gene family | AL4G01030 AL4G01060 AL4G01070 | 3 |  |
| Tree-based ortholog | AL4G01070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AL4G01070 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-many | ATR_00044G00410 ATR_00044G00400 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00044G00400 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT2G21830 AT2G21840 AT2G21850 | 3 | |
| Tree-based ortholog | 1-to-1 | AT2G21850 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT2G21850 | 1 | ||
| Beta vulgaris | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV4G05760 | 1 | |
| Brassica rapa | Orthologous gene family | many-to-1 | BR02G18550 | 1 | |
| Tree-based ortholog | 1-to-1 | BR02G18550 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR02G18550 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_004G00840 CRU_004G00850 | 2 | |
| Tree-based ortholog | 1-to-1 | CRU_004G00850 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_004G00850 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-many | CP00623G00030 CP00089G00400 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CP00012G00460 CP00012G00420 CP00012G00470 ... | 7 | ||
| Citrullus lanatus | Tree-based ortholog | 1-to-many | CL05G19980 CL05G20010 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G20010 | 1 | ||
| Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00577G00020 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CS00008G01420 CS00008G00810 CS00207G00040 ... | 10 | ||
| Cucumis melo | Tree-based ortholog | 1-to-many | CM01596G05400 CM01596G05430 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM01596G05400 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | 1-to-1 | EG0005G03500 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0005G03510 EG0005G03550 | 2 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-many | FV3G03940 FV6G43220 FV7G23150 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | FV6G43220 FV3G03940 FV3G03890 ... | 5 | ||
| Glycine max | Tree-based ortholog | 1-to-many | GM19G33040 GM03G30150 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM03G30150 GM19G33040 | 2 | ||
| Gossypium raimondii | Tree-based ortholog | 1-to-many | GR08G15910 GR13G18810 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR07G31030 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ1G059840 | 1 | |
| Malus domestica | Tree-based ortholog | 1-to-many | MD00G351960 MD00G257560 MD14G004830 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD13G028450 MD14G004830 MD00G257560 ... | 5 | ||
| Manihot esculenta | Tree-based ortholog | 1-to-many | ME03602G00030 ME00823G00030 ME00823G00040 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME08107G00010 | 1 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS07G42030 | 1 | |
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00096G00950 PP00108G00170 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00096G00950 PP00108G00170 | 2 | ||
| Populus trichocarpa | Orthologous gene family | many-to-1 | PT19G02010 | 1 | |
| Tree-based ortholog | 1-to-1 | PT19G02010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT19G02010 | 1 | ||
| Prunus persica | Tree-based ortholog | 1-to-1 | PPE_007G08800 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_007G09170 | 1 | ||
| Ricinus communis | Tree-based ortholog | 1-to-many | RC30170G02400 RC29765G00320 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30099G00610 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-many | SL01G073800 SL01G073820 SL01G073810 ... | 10 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G073840 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | 1-to-1 | ST10G020250 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G027130 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-1 | TP4G01290 | 1 | |
| Tree-based ortholog | 1-to-many | TP2G04140 TP3G32270 TP4G05840 ... | 11 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP4G01290 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-many | TC0005G26750 TC0005G26830 TC0005G28170 ... | 4 | |
| Tree-based ortholog | 1-to-many | TC0005G26760 TC0005G26750 TC0005G26830 ... | 10 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | TC0005G26750 TC0005G26830 | 2 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-1 | VV06G06850 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV18G13010 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM07G18120 ZM02G32880 | 2 | |