Integrative Orthology Viewer: AL3G41700 (Arabidopsis lyrata)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | AL1G47950 AL3G41700 | 2 | |
Tree-based ortholog | AL3G41700 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AL3G41700 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00009G04070 | 1 | |
Tree-based ortholog | 1-to-1 | ATR_00009G04070 | 1 | ||
Anchor point | N/A | ATR_00009G04070 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00009G04070 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G52920 AT2G20770 | 2 | |
Tree-based ortholog | 1-to-1 | AT2G20770 | 1 | ||
Anchor point | N/A | AT2G20770 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT2G20770 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV4G16720 BV8G12110 | 2 | |
Tree-based ortholog | 1-to-1 | BV8G12110 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV8G12110 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-1 | BR06G01480 | 1 | |
Tree-based ortholog | 1-to-1 | BR07G00090 | 1 | ||
Anchor point | N/A | BR07G00090 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR06G01480 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G40110 CRU_003G33950 | 2 | |
Tree-based ortholog | 1-to-1 | CRU_003G33950 | 1 | ||
Anchor point | N/A | CRU_003G33950 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G33950 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00034G01370 CP00080G00310 | 2 | |
Tree-based ortholog | 1-to-1 | CP00034G01370 | 1 | ||
Anchor point | N/A | CP00034G01370 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00034G01370 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR03G02260 | 1 | |
Tree-based ortholog | 1-to-1 | CR03G02260 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR03G02260 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL11G12150 | 1 | |
Tree-based ortholog | 1-to-1 | CL11G12150 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL11G12150 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00012G00240 | 1 | |
Tree-based ortholog | 1-to-1 | CS00012G00240 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00012G00240 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00029G00860 | 1 | |
Tree-based ortholog | 1-to-1 | CM00029G00860 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00029G00860 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0006G28310 | 1 | |
Tree-based ortholog | 1-to-1 | EG0006G28310 | 1 | ||
Anchor point | N/A | EG0006G28310 EG0001G14870 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G28310 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV2G45850 | 1 | |
Tree-based ortholog | 1-to-1 | FV2G45850 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G45850 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM12G12330 GM12G35060 | 2 | |
Tree-based ortholog | 1-to-1 | GM12G12330 | 1 | ||
Anchor point | N/A | GM12G12330 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM12G12330 | 1 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR00G01570 GR13G07520 | 2 | |
Tree-based ortholog | 1-to-1 | GR13G07520 | 1 | ||
Anchor point | N/A | GR13G07520 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR13G07520 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ3G008510 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G008510 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G007900 MD00G046290 MD03G019470 ... | 4 | |
Tree-based ortholog | 1-to-many | MD00G046290 MD00G007900 MD09G023640 | 3 | ||
Anchor point | N/A | MD09G023640 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G046290 MD09G023640 MD00G007900 | 3 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME05144G00130 ME11689G00450 | 2 | |
Tree-based ortholog | 1-to-1 | ME11689G00450 | 1 | ||
Anchor point | N/A | ME11689G00450 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME11689G00450 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT2G079700 MT6G007490 | 2 | |
Tree-based ortholog | 1-to-1 | MT6G007490 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT6G007490 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS04G44730 OS10G35480 | 2 | |
Tree-based ortholog | 1-to-many | OS10G35480 OS04G44730 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS10G35480 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-1 | PP00336G00420 | 1 | |
Tree-based ortholog | 1-to-many | PP00033G01890 PP00336G00420 PP00213G00600 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00213G00600 PP00033G01890 | 2 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT01G40320 PT13G13470 | 2 | |
Tree-based ortholog | 1-to-1 | PT13G13470 | 1 | ||
Anchor point | N/A | PT13G13470 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT13G13470 | 1 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_003G13770 PPE_004G17790 | 2 | |
Tree-based ortholog | 1-to-1 | PPE_003G13770 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_003G13770 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC28460G00030 RC29983G01150 | 2 | |
Tree-based ortholog | 1-to-1 | RC29983G01150 | 1 | ||
Anchor point | N/A | RC29983G01150 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29983G01150 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL07G063310 SL07G063320 SL10G008460 | 3 | |
Tree-based ortholog | 1-to-1 | SL10G008460 | 1 | ||
Anchor point | N/A | SL10G008460 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL10G008460 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST07G023870 ST07G023880 ST10G009020 | 3 | |
Tree-based ortholog | 1-to-1 | ST10G009020 | 1 | ||
Anchor point | N/A | ST10G009020 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST10G009020 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G39490 TP3G34020 | 2 | |
Tree-based ortholog | 1-to-1 | TP3G34020 | 1 | ||
Anchor point | N/A | TP3G34020 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G34020 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0002G17260 TC0007G07190 | 2 | |
Tree-based ortholog | 1-to-1 | TC0002G17260 | 1 | ||
Anchor point | N/A | TC0002G17260 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G17260 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV12G10450 VV19G03300 | 2 | |
Tree-based ortholog | 1-to-1 | VV12G10450 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV12G10450 | 1 | ||
Zea mays | Orthologous gene family | many-to-1 | ZM01G41090 | 1 | |
Tree-based ortholog | 1-to-1 | ZM01G41090 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G41090 | 1 |