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Integrative Orthology Viewer:
AL3G39410
(Arabidopsis lyrata)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis lyrata | Orthologous gene family | AL3G39410 | 1 |  |
| Tree-based ortholog | AL3G39410 | 1 | ||
| Anchor point | AL2G24110 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AL3G39410 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-many | ATR_00010G04520 ATR_00119G00530 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00038G00070 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT2G18350 | 1 | |
| Tree-based ortholog | 1-to-1 | AT2G18350 | 1 | ||
| Anchor point | 1-to-many | AT2G18350 AT3G50890 AT1G75240 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT2G18350 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-1 | BV6G15700 | 1 | |
| Anchor point | 1-to-1 | BV6G15700 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G15700 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-1 | BR09G09410 | 1 | |
| Tree-based ortholog | 1-to-many | BR07G01940 BR09G09410 | 2 | ||
| Anchor point | 1-to-many | BR09G09410 BR07G01940 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G09410 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_003G31260 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_003G31260 | 1 | ||
| Anchor point | 1-to-many | CRU_002G20820 CRU_005G16150 CRU_003G31260 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G31260 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-many | CP00002G01150 CP00786G00010 CP48208G00010 ... | 4 | |
| Anchor point | 1-to-1 | CP00006G01180 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00006G01180 | 1 | ||
| Citrullus lanatus | Tree-based ortholog | 1-to-many | CL04G10270 CL06G16780 CL04G12060 ... | 4 | |
| Anchor point | 1-to-many | CL01G19730 CL08G14730 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL01G19730 | 1 | ||
| Citrus sinensis | Tree-based ortholog | 1-to-many | CS00498G00120 CS00015G01670 | 2 | |
| Anchor point | 1-to-many | CS00006G03650 CS00002G04340 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00002G04340 | 1 | ||
| Cucumis melo | Tree-based ortholog | 1-to-many | CM00001G02540 CM00030G00930 CM00001G00710 ... | 4 | |
| Anchor point | 1-to-many | CM00007G08650 CM00027G03360 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00007G08650 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | 1-to-many | EG0007G15570 EG0008G04930 EG0011G20580 | 3 | |
| Anchor point | 1-to-1 | EG0009G20590 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G12700 | 1 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-many | FV5G16120 FV6G44550 FV5G13300 | 3 | |
| Anchor point | 1-to-many | FV1G15460 FV2G50790 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G50790 | 1 | ||
| Glycine max | Tree-based ortholog | 1-to-many | GM08G06120 GM05G33600 GM09G30061 ... | 13 | |
| Anchor point | 1-to-many | GM11G07360 GM16G25280 GM01G37993 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM11G07360 GM01G37993 | 2 | ||
| Gossypium raimondii | Tree-based ortholog | 1-to-many | GR07G27410 GR06G19060 GR08G04480 ... | 6 | |
| Anchor point | 1-to-many | GR03G01410 GR07G05050 GR09G20130 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR07G20250 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-many | LJ2G009630 LJ4G038350 LJ6G012730 ... | 4 | |
| Anchor point | 1-to-1 | LJ2G030870 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G030870 | 1 | ||
| Malus domestica | Tree-based ortholog | 1-to-many | MD00G183100 MD06G009570 MD06G020120 ... | 8 | |
| Anchor point | 1-to-1 | MD12G015750 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G386960 MD02G009150 | 2 | ||
| Manihot esculenta | Tree-based ortholog | 1-to-many | ME03802G00080 ME08799G00940 ME11170G00200 ... | 8 | |
| Anchor point | 1-to-many | ME06512G00140 ME07012G01190 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME02978G00140 ME07012G01190 | 2 | ||
| Medicago truncatula | Tree-based ortholog | 1-to-many | MT6G073013 MT8G069380 MT8G051480 | 3 | |
| Anchor point | 1-to-1 | MT5G020510 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT5G020510 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS03G50920 OS09G24810 OS11G03420 ... | 4 | |
| Anchor point | 1-to-1 | OS02G47770 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS05G50310 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-1 | PP00031G01200 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00165G00520 PP00003G02180 PP00235G00550 ... | 6 | ||
| Populus trichocarpa | Tree-based ortholog | 1-to-many | PT19G02140 PT12G04090 PT15G03270 ... | 5 | |
| Anchor point | 1-to-many | PT05G22790 PT07G02410 PT05G12250 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT07G02410 PT05G12250 | 2 | ||
| Prunus persica | Tree-based ortholog | 1-to-many | PPE_005G23980 PPE_003G24680 PPE_005G19810 | 3 | |
| Anchor point | 1-to-many | PPE_001G38640 PPE_007G17660 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G38640 | 1 | ||
| Ricinus communis | Tree-based ortholog | 1-to-many | RC29680G00540 RC30138G02490 RC27895G00020 | 3 | |
| Anchor point | 1-to-many | RC29634G00740 RC30170G04070 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29634G00740 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-many | SL03G098060 SL05G020000 SL05G018740 ... | 7 | |
| Anchor point | 1-to-1 | SL02G085160 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL02G085160 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | 1-to-many | ST03G022700 ST05G017720 ST05G017730 ... | 8 | |
| Anchor point | 1-to-1 | ST02G028310 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST02G028310 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP3G31750 | 1 | |
| Tree-based ortholog | 1-to-1 | TP3G31750 | 1 | ||
| Anchor point | 1-to-many | TP5G30400 TP3G31750 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G31750 | 1 | ||
| Theobroma cacao | Tree-based ortholog | 1-to-many | TC0005G26680 TC0002G30310 TC0003G06750 ... | 7 | |
| Anchor point | 1-to-many | TC0008G02700 TC0001G03230 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G03230 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-many | VV00G26670 VV01G12070 VV07G01160 | 3 | |
| Anchor point | 1-to-many | VV18G09000 VV04G02080 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV04G02080 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-many | ZM01G50950 ZM05G05290 ZM04G14470 ... | 7 | |
| Anchor point | 1-to-1 | ZM05G38030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM02G31990 ZM01G35530 | 2 |