Integrative Orthology Viewer: AL3G38130 (Arabidopsis lyrata)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | AL3G38130 | 1 | |
Tree-based ortholog | AL3G38130 | 1 | ||
Anchor point | AL1G22110 AL2G25460 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | AL3G38130 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00022G01190 | 1 | |
Tree-based ortholog | 1-to-1 | ATR_00022G01190 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00022G01190 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT2G17410 | 1 | |
Tree-based ortholog | 1-to-1 | AT2G17410 | 1 | ||
Anchor point | many-to-many | AT1G76510 AT1G20910 AT2G17410 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT2G17410 | 1 | ||
Beta vulgaris | Orthologous gene family | 1-to-1 | BV0G74910 | 1 | |
Tree-based ortholog | 1-to-1 | BV1G09900 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G74910 | 1 | ||
Brassica rapa | Orthologous gene family | 1-to-many | BR09G08900 BR10G17230 | 2 | |
Tree-based ortholog | 1-to-many | BR10G17230 BR09G08900 | 2 | ||
Anchor point | many-to-many | BR06G15110 BR09G08900 BR10G17230 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR10G17230 | 1 | ||
Capsella rubella | Orthologous gene family | 1-to-1 | CRU_003G30270 | 1 | |
Tree-based ortholog | 1-to-1 | CRU_003G30270 | 1 | ||
Anchor point | many-to-many | CRU_003G30270 CRU_001G19540 CRU_002G22110 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G30270 | 1 | ||
Carica papaya | Orthologous gene family | 1-to-1 | CP00070G00230 | 1 | |
Tree-based ortholog | 1-to-1 | CP00026G00020 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00070G00230 | 1 | ||
Citrullus lanatus | Orthologous gene family | 1-to-1 | CL10G02080 | 1 | |
Tree-based ortholog | 1-to-1 | CL10G02080 | 1 | ||
Anchor point | many-to-1 | CL10G02080 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL10G02080 | 1 | ||
Citrus sinensis | Orthologous gene family | 1-to-1 | CS00017G02560 | 1 | |
Tree-based ortholog | 1-to-1 | CS00002G07210 | 1 | ||
Anchor point | many-to-many | CS00002G07210 CS00023G02200 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00017G02560 | 1 | ||
Cucumis melo | Orthologous gene family | 1-to-1 | CM00021G00110 | 1 | |
Tree-based ortholog | 1-to-1 | CM00021G00110 | 1 | ||
Anchor point | many-to-1 | CM00021G00110 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00021G00110 | 1 | ||
Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0009G18490 | 1 | |
Tree-based ortholog | 1-to-1 | EG0006G14840 | 1 | ||
Anchor point | many-to-1 | EG0009G18490 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0009G18490 | 1 | ||
Fragaria vesca | Orthologous gene family | 1-to-many | FV1G11520 FV2G12700 | 2 | |
Tree-based ortholog | 1-to-1 | FV0G34040 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV1G11520 | 1 | ||
Glycine max | Orthologous gene family | 1-to-many | GM01G36040 GM09G32820 GM11G09370 ... | 4 | |
Tree-based ortholog | 1-to-many | GM04G01560 GM06G01640 | 2 | ||
Anchor point | many-to-many | GM16G21840 GM11G09370 GM01G36040 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM16G21840 GM11G09370 GM01G36040 ... | 4 | ||
Gossypium raimondii | Orthologous gene family | 1-to-1 | GR03G00080 | 1 | |
Tree-based ortholog | 1-to-1 | GR02G11240 | 1 | ||
Anchor point | many-to-many | GR03G00080 GR12G13770 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR03G00080 | 1 | ||
Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ1G044330 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G044330 | 1 | ||
Malus domestica | Orthologous gene family | 1-to-many | MD00G218490 MD00G344810 MD02G008970 | 3 | |
Tree-based ortholog | 1-to-1 | MD06G000400 | 1 | ||
Anchor point | many-to-1 | MD02G008970 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G218490 | 1 | ||
Manihot esculenta | Orthologous gene family | 1-to-many | ME06512G02260 ME07520G03710 | 2 | |
Tree-based ortholog | 1-to-many | ME04300G00020 ME04047G00080 ME06512G02260 ... | 4 | ||
Anchor point | many-to-many | ME06512G02260 ME07520G03710 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME06512G02260 ME07520G03710 | 2 | ||
Medicago truncatula | Orthologous gene family | 1-to-1 | MT5G024920 | 1 | |
Tree-based ortholog | 1-to-1 | MT3G116200 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G116200 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS06G41730 | 1 | |
Tree-based ortholog | 1-to-many | OS02G48370 OS06G41730 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS06G41730 | 1 | ||
Physcomitrella patens | Orthologous gene family | 1-to-many | PP00066G01200 PP00131G00620 | 2 | |
Tree-based ortholog | 1-to-many | PP00131G00620 PP00066G01200 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00131G00620 PP00066G01200 | 2 | ||
Populus trichocarpa | Orthologous gene family | 1-to-1 | PT01G45650 | 1 | |
Tree-based ortholog | 1-to-1 | PT02G00370 | 1 | ||
Anchor point | many-to-1 | PT04G20890 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT01G45650 | 1 | ||
Prunus persica | Orthologous gene family | 1-to-1 | PPE_007G20830 | 1 | |
Tree-based ortholog | 1-to-1 | PPE_005G00470 | 1 | ||
Anchor point | many-to-many | PPE_008G19960 PPE_007G20830 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_007G20830 | 1 | ||
Ricinus communis | Orthologous gene family | 1-to-1 | RC29682G00090 | 1 | |
Tree-based ortholog | 1-to-1 | RC30170G07430 | 1 | ||
Anchor point | many-to-1 | RC30170G07430 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29682G00090 | 1 | ||
Solanum lycopersicum | Tree-based ortholog | 1-to-many | SL01G018070 SL01G017790 SL01G017030 ... | 6 | |
Anchor point | many-to-many | SL04G082820 SL01G112330 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL04G082820 | 1 | ||
Solanum tuberosum | Orthologous gene family | 1-to-1 | ST01G049650 | 1 | |
Tree-based ortholog | 1-to-many | ST12G016420 ST12G028070 ST01G049650 ... | 4 | ||
Anchor point | many-to-many | ST12G028070 ST01G049650 ST04G036330 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G049650 | 1 | ||
Thellungiella parvula | Orthologous gene family | 1-to-1 | TP3G30730 | 1 | |
Tree-based ortholog | 1-to-1 | TP3G30730 | 1 | ||
Anchor point | many-to-many | TP3G30730 TP1G18610 TP5G31670 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G30730 | 1 | ||
Theobroma cacao | Orthologous gene family | 1-to-1 | TC0001G00150 | 1 | |
Tree-based ortholog | 1-to-1 | TC0008G09510 | 1 | ||
Anchor point | many-to-many | TC0001G00150 TC0002G14280 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G00150 | 1 | ||
Vitis vinifera | Orthologous gene family | 1-to-1 | VV04G04640 | 1 | |
Tree-based ortholog | 1-to-1 | VV18G12880 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV04G04640 | 1 | ||
Zea mays | Orthologous gene family | 1-to-many | ZM06G13180 ZM09G15280 | 2 | |
Tree-based ortholog | 1-to-many | ZM05G38420 ZM04G22650 ZM06G13180 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM06G13180 | 1 |