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Integrative Orthology Viewer:
AL3G28610
(Arabidopsis lyrata)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis lyrata | Orthologous gene family | AL3G28610 | 1 |  |
| Tree-based ortholog | AL3G28610 AL2G13640 | 2 | ||
| Anchor point | AL0G03580 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AL3G28610 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | many-to-1 | ATR_00020G01080 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00020G01080 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT3G25030 | 1 | |
| Tree-based ortholog | many-to-1 | AT3G25030 | 1 | ||
| Anchor point | 1-to-many | AT3G25030 AT4G13100 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G25030 | 1 | ||
| Beta vulgaris | Tree-based ortholog | many-to-1 | BV7G14890 | 1 | |
| Anchor point | 1-to-1 | BV7G14890 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV7G14890 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-1 | BR07G03690 | 1 | |
| Tree-based ortholog | many-to-1 | BR07G03690 | 1 | ||
| Anchor point | 1-to-1 | BR07G03690 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR07G03690 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_003G24340 | 1 | |
| Tree-based ortholog | many-to-1 | CRU_003G24340 | 1 | ||
| Anchor point | 1-to-many | CRU_003G24340 CRU_007G28390 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G24340 | 1 | ||
| Carica papaya | Tree-based ortholog | many-to-1 | CP00008G01340 | 1 | |
| Anchor point | 1-to-1 | CP00008G01340 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00008G01340 | 1 | ||
| Citrullus lanatus | Tree-based ortholog | many-to-1 | CL07G00370 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL09G08400 | 1 | ||
| Citrus sinensis | Tree-based ortholog | many-to-1 | CS00029G00690 | 1 | |
| Anchor point | 1-to-1 | CS00029G00690 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00029G00690 | 1 | ||
| Cucumis melo | Tree-based ortholog | many-to-1 | CM00123G00070 | 1 | |
| Anchor point | 1-to-1 | CM00046G00610 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00046G00610 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | many-to-1 | EG0008G06790 | 1 | |
| Anchor point | 1-to-many | EG0011G17730 EG0008G06790 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0008G06790 | 1 | ||
| Fragaria vesca | Tree-based ortholog | many-to-1 | FV2G14690 | 1 | |
| Anchor point | 1-to-1 | FV2G14690 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G14690 | 1 | ||
| Glycine max | Tree-based ortholog | many-to-many | GM08G46530 GM18G35410 | 2 | |
| Anchor point | 1-to-1 | GM08G46530 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM16G15380 GM03G14040 | 2 | ||
| Gossypium raimondii | Tree-based ortholog | many-to-many | GR04G22610 GR01G18740 GR01G23340 ... | 4 | |
| Anchor point | 1-to-many | GR01G23340 GR01G18740 GR04G22610 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR01G23340 | 1 | ||
| Lotus japonicus | Tree-based ortholog | many-to-many | LJ6G021800 LJ4G001580 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ6G021800 | 1 | ||
| Malus domestica | Tree-based ortholog | many-to-many | MD05G015750 MD00G394210 MD00G244810 | 3 | |
| Anchor point | 1-to-1 | MD05G015750 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G244810 | 1 | ||
| Manihot esculenta | Tree-based ortholog | many-to-1 | ME11661G00130 | 1 | |
| Anchor point | 1-to-1 | ME11661G00130 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME08287G00030 | 1 | ||
| Medicago truncatula | Tree-based ortholog | many-to-many | MT3G065180 MT7G056407 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G132760 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | many-to-1 | OS01G68900 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G68900 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | many-to-many | PP00097G00280 PP00039G00630 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00097G00280 PP00039G00630 | 2 | ||
| Populus trichocarpa | Tree-based ortholog | many-to-1 | PT02G24380 | 1 | |
| Anchor point | 1-to-1 | PT02G24380 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT02G24380 | 1 | ||
| Prunus persica | Tree-based ortholog | many-to-1 | PPE_008G21690 | 1 | |
| Anchor point | 1-to-1 | PPE_008G21690 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_004G01290 | 1 | ||
| Ricinus communis | Tree-based ortholog | many-to-1 | RC30204G00160 | 1 | |
| Anchor point | 1-to-1 | RC30204G00160 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30204G00160 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL09G059990 | 1 | |
| Tree-based ortholog | many-to-many | SL02G081180 SL03G031830 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL09G059990 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST09G018130 | 1 | |
| Tree-based ortholog | many-to-many | ST02G024290 ST03G008340 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST09G018130 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP3G22610 | 1 | |
| Tree-based ortholog | many-to-1 | TP7G10480 | 1 | ||
| Anchor point | 1-to-many | TP7G10480 TP3G22610 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G22610 | 1 | ||
| Theobroma cacao | Tree-based ortholog | many-to-1 | TC0001G21920 | 1 | |
| Anchor point | 1-to-1 | TC0001G21920 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G21920 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV00G05580 | 1 | |
| Tree-based ortholog | many-to-1 | VV00G05580 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV00G05580 | 1 | ||
| Zea mays | Tree-based ortholog | many-to-many | ZM03G23050 ZM08G29190 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM03G23050 ZM08G29190 | 2 |