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Integrative Orthology Viewer:
AL3G22880
(Arabidopsis lyrata)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis lyrata | Orthologous gene family | AL1G45840 AL3G22880 | 2 |  |
| Tree-based ortholog | AL3G22880 | 1 | ||
| Anchor point | AL1G45840 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AL3G22880 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00024G02260 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00066G00060 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G51190 AT3G20840 | 2 | |
| Tree-based ortholog | 1-to-1 | AT3G20840 | 1 | ||
| Anchor point | 1-to-many | AT3G20840 AT1G51190 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G20840 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV4G12580 | 1 | |
| Tree-based ortholog | 1-to-1 | BV4G12580 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV4G12580 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR05G17940 BR05G22750 BR06G02500 | 3 | |
| Tree-based ortholog | 1-to-1 | BR05G22750 | 1 | ||
| Anchor point | 1-to-many | BR06G02500 BR01G29760 BR05G17940 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR05G22750 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_001G38190 CRU_003G19860 | 2 | |
| Tree-based ortholog | 1-to-1 | CRU_003G19860 | 1 | ||
| Anchor point | 1-to-many | CRU_001G38190 CRU_003G19860 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G19860 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00084G00810 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00084G00810 | 1 | ||
| Anchor point | 1-to-1 | CP00084G00810 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00084G00810 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-many | CR08G07090 CR01G02270 CR01G02250 ... | 6 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CR01G02270 CR01G02250 | 2 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL02G23350 | 1 | |
| Tree-based ortholog | 1-to-1 | CL02G23350 | 1 | ||
| Anchor point | 1-to-1 | CL02G23350 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL02G23350 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00033G00130 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00033G00130 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00033G00130 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00022G04380 CM00577G00010 | 2 | |
| Tree-based ortholog | 1-to-1 | CM00577G00010 | 1 | ||
| Anchor point | 1-to-1 | CM00022G04380 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00030G03980 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0010G06980 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0010G06980 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0010G06980 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV3G42420 | 1 | |
| Tree-based ortholog | 1-to-1 | FV3G42420 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G42420 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM11G14040 GM12G06010 | 2 | |
| Tree-based ortholog | 1-to-1 | GM11G14040 | 1 | ||
| Anchor point | 1-to-many | GM12G06010 GM11G14040 GM13G40470 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM12G06010 GM11G14040 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR01G14000 GR06G12940 | 2 | |
| Tree-based ortholog | 1-to-many | GR01G14000 GR06G12940 | 2 | ||
| Anchor point | 1-to-1 | GR01G14000 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR01G14000 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-many | LJ3G024970 LJ3G045710 | 2 | |
| Tree-based ortholog | 1-to-many | LJ3G024970 LJ3G045710 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G024970 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G159300 MD03G001990 | 2 | |
| Tree-based ortholog | 1-to-many | MD00G159300 MD03G001990 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G159300 MD03G001990 | 2 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME04681G00270 ME10963G00570 | 2 | |
| Tree-based ortholog | 1-to-1 | ME10963G00570 | 1 | ||
| Anchor point | 1-to-many | ME04681G00270 ME10963G00570 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME04681G00270 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT2G098180 MT4G065370 | 2 | |
| Tree-based ortholog | 1-to-1 | MT4G065370 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT2G098180 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS04G42570 OS01G67410 OS02G40070 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G67410 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-many | OL21G01100 OL13G01880 OL03G03720 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL03G02210 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00066G01400 PP00066G01300 PP00131G00720 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00066G01400 PP00066G01300 PP00131G00760 ... | 4 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT01G01840 PT03G20570 | 2 | |
| Tree-based ortholog | 1-to-1 | PT03G20570 | 1 | ||
| Anchor point | 1-to-many | PT01G01840 PT03G20570 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT01G01840 PT03G20570 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_006G05010 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_006G05010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G05010 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC29562G00010 | 1 | |
| Tree-based ortholog | 1-to-1 | RC29562G00010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29929G00390 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL11G061750 | 1 | |
| Tree-based ortholog | 1-to-1 | SL11G061750 | 1 | ||
| Anchor point | 1-to-1 | SL11G061750 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL11G061750 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-1 | ST11G016490 | 1 | |
| Tree-based ortholog | 1-to-1 | ST11G016490 | 1 | ||
| Anchor point | 1-to-1 | ST11G016490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST11G016490 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-1 | TP3G18860 | 1 | |
| Tree-based ortholog | 1-to-1 | TP3G18860 | 1 | ||
| Anchor point | 1-to-many | TP3G18860 TP1G37920 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G18860 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0009G22440 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0009G22440 | 1 | ||
| Anchor point | 1-to-1 | TC0009G22440 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0009G22440 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV06G06350 | 1 | |
| Tree-based ortholog | 1-to-1 | VV06G06350 | 1 | ||
| Anchor point | 1-to-1 | VV06G06350 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV06G06350 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-1 | ZM05G33670 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM05G33670 | 1 |