Integrative Orthology Viewer: AL3G21030 (Arabidopsis lyrata)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | AL1G18700 AL3G21030 | 2 | |
Tree-based ortholog | AL3G21030 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AL3G21030 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00019G02150 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00051G00580 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G17745 AT3G19480 | 2 | |
Tree-based ortholog | 1-to-1 | AT3G19480 | 1 | ||
Anchor point | N/A | AT3G19480 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G19480 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV8G13880 | 1 | |
Tree-based ortholog | 1-to-1 | BV9G19800 | 1 | ||
Anchor point | N/A | BV9G19800 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV9G19800 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR03G35920 BR08G14090 BR08G26370 | 3 | |
Tree-based ortholog | 1-to-1 | BR03G35920 | 1 | ||
Anchor point | N/A | BR03G35920 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR03G35920 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G16690 CRU_003G18410 | 2 | |
Tree-based ortholog | 1-to-1 | CRU_003G18410 | 1 | ||
Anchor point | N/A | CRU_003G18410 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G18410 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00375G00040 | 1 | |
Tree-based ortholog | 1-to-1 | CP00106G00810 | 1 | ||
Anchor point | N/A | CP00106G00810 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00021G01450 | 1 | ||
Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR07G07710 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR07G07710 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL07G12010 | 1 | |
Tree-based ortholog | 1-to-1 | CL05G11520 | 1 | ||
Anchor point | N/A | CL05G11510 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G11520 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00729G00080 | 1 | |
Tree-based ortholog | 1-to-1 | CS00065G00660 | 1 | ||
Anchor point | N/A | CS00065G00660 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00065G00660 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00083G00050 | 1 | |
Tree-based ortholog | 1-to-1 | CM00038G01810 | 1 | ||
Anchor point | N/A | CM00038G01810 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00038G01810 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0003G25390 EG0004G16310 EG0005G05410 ... | 5 | |
Tree-based ortholog | 1-to-many | EG0007G09990 EG0008G26120 EG0008G26110 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G18840 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV0G18750 | 1 | |
Tree-based ortholog | 1-to-1 | FV6G38620 | 1 | ||
Anchor point | N/A | FV6G38620 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G38620 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM07G00540 GM08G23860 | 2 | |
Tree-based ortholog | 1-to-many | GM20G26530 GM10G40750 | 2 | ||
Anchor point | N/A | GM20G26530 GM10G40750 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM20G26530 GM10G40750 | 2 | ||
Gossypium raimondii | Tree-based ortholog | 1-to-many | GR12G14910 GR13G04690 GR08G02330 | 3 | |
Anchor point | N/A | GR12G14910 GR13G04690 GR08G02330 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR13G04690 GR08G02330 | 2 | ||
Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ5G037170 | 1 | |
Anchor point | N/A | LJ5G037170 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ5G037170 | 1 | ||
Malus domestica | Orthologous gene family | many-to-1 | MD17G012690 | 1 | |
Tree-based ortholog | 1-to-1 | MD03G003050 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD03G003050 | 1 | ||
Manihot esculenta | Tree-based ortholog | 1-to-many | ME09969G00010 ME04205G00040 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME04205G00040 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT4G005880 | 1 | |
Tree-based ortholog | 1-to-1 | MT1G107480 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G107480 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS04G55720 OS06G44460 OS08G34720 | 3 | |
Tree-based ortholog | 1-to-1 | OS04G55720 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS04G55720 | 1 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL16G00840 | 1 | |
Tree-based ortholog | 1-to-many | OL05G01380 OL10G01490 OL11G01810 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL16G00840 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00011G01600 PP00087G00450 PP11232G00010 | 3 | |
Tree-based ortholog | 1-to-1 | PP00002G02510 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00087G00450 PP00011G01600 | 2 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT08G00950 PT10G24960 PT14G02280 | 3 | |
Tree-based ortholog | 1-to-many | PT09G09660 PT01G30090 | 2 | ||
Anchor point | N/A | PT01G30090 PT09G09660 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT01G30090 PT09G09660 | 2 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_003G14990 | 1 | |
Tree-based ortholog | 1-to-1 | PPE_008G15300 | 1 | ||
Anchor point | N/A | PPE_008G15300 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_008G15300 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC30158G00100 | 1 | |
Tree-based ortholog | 1-to-1 | RC29801G00500 | 1 | ||
Anchor point | N/A | RC29801G00500 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29801G00500 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL03G123830 | 1 | |
Tree-based ortholog | 1-to-many | SL03G112070 SL10G049890 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL03G112070 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST03G034130 | 1 | |
Tree-based ortholog | 1-to-many | ST03G026180 ST11G022710 ST10G013480 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ST11G022710 ST03G026180 | 2 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G15820 TP3G17530 | 2 | |
Tree-based ortholog | 1-to-1 | TP3G17530 | 1 | ||
Anchor point | N/A | TP3G17530 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G17530 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0002G10320 TC0006G01680 | 2 | |
Tree-based ortholog | 1-to-many | TC0002G10320 TC0008G00070 | 2 | ||
Anchor point | N/A | TC0002G10320 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G10320 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV18G06640 | 1 | |
Tree-based ortholog | 1-to-1 | VV03G00560 | 1 | ||
Anchor point | N/A | VV03G00560 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV18G06640 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G37680 ZM02G02310 ZM09G16640 ... | 4 | |
Tree-based ortholog | 1-to-many | ZM10G25280 ZM02G02310 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM10G25280 ZM02G02310 | 2 |