Integrative Orthology Viewer: AL3G16790 (Arabidopsis lyrata)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | AL3G16790 | 1 | |
Tree-based ortholog | AL3G16790 | 1 | ||
Anchor point | AL1G16170 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AL3G16790 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00004G01890 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00004G01890 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT3G15790 | 1 | |
Tree-based ortholog | 1-to-1 | AT3G15790 | 1 | ||
Anchor point | 1-to-many | AT3G15790 AT1G15340 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G15790 | 1 | ||
Beta vulgaris | Tree-based ortholog | 1-to-1 | BV8G02480 | 1 | |
Anchor point | 1-to-1 | BV8G02480 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV8G02480 | 1 | ||
Brassica rapa | Orthologous gene family | 1-to-1 | BR01G33060 | 1 | |
Tree-based ortholog | 1-to-1 | BR01G33060 | 1 | ||
Anchor point | 1-to-many | BR01G33060 BR08G27130 BR09G47660 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR01G33060 | 1 | ||
Capsella rubella | Tree-based ortholog | 1-to-1 | CRU_001G14430 | 1 | |
Anchor point | 1-to-1 | CRU_001G14430 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G14430 | 1 | ||
Carica papaya | Tree-based ortholog | 1-to-1 | CP00046G00150 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00010G02410 | 1 | ||
Citrullus lanatus | Tree-based ortholog | 1-to-1 | CL09G02500 | 1 | |
Anchor point | 1-to-1 | CL09G02500 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL07G13530 | 1 | ||
Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00268G00080 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00268G00080 | 1 | ||
Cucumis melo | Tree-based ortholog | 1-to-1 | CM00031G03550 | 1 | |
Anchor point | 1-to-many | CM00031G03550 CM00060G00620 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00031G03550 | 1 | ||
Eucalyptus grandis | Tree-based ortholog | 1-to-1 | EG0002G31900 | 1 | |
Fragaria vesca | Tree-based ortholog | 1-to-1 | FV6G26000 | 1 | |
Anchor point | 1-to-many | FV6G26000 FV1G05370 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV1G05370 | 1 | ||
Glycine max | Tree-based ortholog | 1-to-many | GM15G01040 GM13G44230 | 2 | |
Anchor point | 1-to-many | GM13G44230 GM15G01040 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM13G44230 GM15G01040 | 2 | ||
Gossypium raimondii | Tree-based ortholog | 1-to-many | GR11G08390 GR06G10110 | 2 | |
Anchor point | 1-to-many | GR10G06280 GR06G10110 GR11G08390 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR11G08390 | 1 | ||
Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ3G030800 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G031540 | 1 | ||
Malus domestica | Tree-based ortholog | 1-to-many | MD00G002120 MD06G008640 MD02G021040 | 3 | |
Anchor point | 1-to-many | MD15G010490 MD06G008640 MD02G003010 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD15G010490 MD15G010510 MD02G003010 | 3 | ||
Manihot esculenta | Tree-based ortholog | 1-to-many | ME12498G00250 ME04151G00290 | 2 | |
Anchor point | 1-to-many | ME04151G00290 ME12498G00250 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME04151G00290 | 1 | ||
Medicago truncatula | Tree-based ortholog | 1-to-1 | MT4G010210 | 1 | |
Anchor point | 1-to-1 | MT4G010210 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MT00G20700 MT4G114785 MT4G114770 ... | 4 | ||
Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-1 | OS12G42550 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS12G42550 | 1 | ||
Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00149G00620 PP00392G00120 PP00051G00010 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00030G00600 | 1 | ||
Populus trichocarpa | Tree-based ortholog | 1-to-many | PT06G06770 PT18G12970 | 2 | |
Anchor point | 1-to-1 | PT01G19240 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT06G06770 PT18G12970 | 2 | ||
Prunus persica | Tree-based ortholog | 1-to-1 | PPE_003G07290 | 1 | |
Anchor point | 1-to-many | PPE_007G26260 PPE_003G07290 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_003G07290 | 1 | ||
Ricinus communis | Tree-based ortholog | 1-to-1 | RC29841G01160 | 1 | |
Anchor point | 1-to-1 | RC29841G01160 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29841G01160 | 1 | ||
Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL06G068140 | 1 | |
Tree-based ortholog | 1-to-many | SL06G068140 SL03G116680 | 2 | ||
Anchor point | 1-to-many | SL06G068140 SL03G116680 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL06G068140 | 1 | ||
Solanum tuberosum | Tree-based ortholog | 1-to-many | ST06G023670 ST03G030130 | 2 | |
Anchor point | 1-to-many | ST03G030130 ST06G023670 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST06G023670 | 1 | ||
Thellungiella parvula | Orthologous gene family | 1-to-1 | TP3G14110 | 1 | |
Tree-based ortholog | 1-to-1 | TP3G14110 | 1 | ||
Anchor point | 1-to-many | TP1G13660 TP3G14110 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G14110 | 1 | ||
Theobroma cacao | Tree-based ortholog | 1-to-1 | TC0006G02280 | 1 | |
Anchor point | 1-to-many | TC0006G02280 TC0009G12360 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0006G02280 | 1 | ||
Vitis vinifera | Orthologous gene family | 1-to-1 | VV09G06960 | 1 | |
Tree-based ortholog | 1-to-1 | VV09G06960 | 1 | ||
Anchor point | 1-to-many | VV09G06960 VV11G06710 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV09G06960 | 1 | ||
Zea mays | Tree-based ortholog | 1-to-many | ZM01G29710 ZM01G46280 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G46280 | 1 |