Integrative Orthology Viewer: AL3G12920 (Arabidopsis lyrata)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | AL3G12920 | 1 | |
Tree-based ortholog | AL3G12920 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AL3G12920 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | 1-to-many | ATR_00001G02790 ATR_00001G02820 | 2 | |
Tree-based ortholog | 1-to-many | ATR_00001G02790 ATR_00001G02820 ATR_00001G02800 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ATR_00001G02790 ATR_00001G02820 | 2 | ||
Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT3G12500 | 1 | |
Tree-based ortholog | 1-to-1 | AT3G12500 | 1 | ||
Anchor point | N/A | AT3G12500 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G12500 | 1 | ||
Beta vulgaris | Orthologous gene family | 1-to-1 | BV1G09720 | 1 | |
Tree-based ortholog | 1-to-1 | BV1G09720 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV1G09720 | 1 | ||
Brassica rapa | Orthologous gene family | 1-to-1 | BR05G30310 | 1 | |
Tree-based ortholog | 1-to-1 | BR05G30310 | 1 | ||
Anchor point | N/A | BR05G30310 BR01G36530 BR03G32980 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR05G30310 | 1 | ||
Capsella rubella | Orthologous gene family | 1-to-1 | CRU_003G11310 | 1 | |
Tree-based ortholog | 1-to-1 | CRU_003G11310 | 1 | ||
Anchor point | N/A | CRU_003G11310 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G11310 | 1 | ||
Carica papaya | Orthologous gene family | 1-to-1 | CP00183G00060 | 1 | |
Tree-based ortholog | 1-to-1 | CP00057G00220 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00057G00220 | 1 | ||
Citrullus lanatus | Orthologous gene family | 1-to-many | CL01G20960 CL01G20970 CL01G20990 ... | 4 | |
Tree-based ortholog | 1-to-many | CL10G01790 CL01G20990 CL01G20960 ... | 7 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL01G20990 | 1 | ||
Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00017G02020 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00017G02020 | 1 | ||
Cucumis melo | Orthologous gene family | 1-to-many | CM00007G09970 CM00007G09980 | 2 | |
Tree-based ortholog | 1-to-many | CM00021G00430 CM00007G09980 CM00007G09970 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00007G09970 | 1 | ||
Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0009G12280 | 1 | |
Tree-based ortholog | 1-to-many | EG0009G12280 EG0086G00060 EG0010G21830 ... | 8 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0009G12280 | 1 | ||
Fragaria vesca | Orthologous gene family | 1-to-many | FV1G12440 FV2G11480 | 2 | |
Tree-based ortholog | 1-to-many | FV2G11480 FV1G12440 FV1G12430 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G11480 | 1 | ||
Glycine max | Orthologous gene family | 1-to-1 | GM02G04820 | 1 | |
Tree-based ortholog | 1-to-many | GM01G36480 GM16G22680 GM02G04820 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM02G04820 | 1 | ||
Gossypium raimondii | Orthologous gene family | 1-to-many | GR02G20350 GR02G20360 | 2 | |
Tree-based ortholog | 1-to-many | GR02G20350 GR02G20360 GR10G05890 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR02G20360 GR02G20350 | 2 | ||
Lotus japonicus | Orthologous gene family | 1-to-1 | LJ1G042010 | 1 | |
Tree-based ortholog | 1-to-many | LJ2G019650 LJ1G042010 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G042010 | 1 | ||
Malus domestica | Orthologous gene family | 1-to-many | MD00G343330 MD00G423370 MD02G010540 | 3 | |
Tree-based ortholog | 1-to-many | MD02G010540 MD00G423370 MD02G010570 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD02G010540 MD00G423370 MD00G343330 | 3 | ||
Manihot esculenta | Orthologous gene family | 1-to-1 | ME02959G00020 | 1 | |
Tree-based ortholog | 1-to-many | ME07579G00040 ME00741G00020 ME00741G00030 ... | 7 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME02959G00020 | 1 | ||
Medicago truncatula | Orthologous gene family | 1-to-many | MT3G118390 MT8G074330 MT8G074350 | 3 | |
Tree-based ortholog | 1-to-many | MT3G118390 MT8G074330 MT8G074335 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G118390 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | 1-to-many | OS03G30470 OS06G51050 OS06G51060 | 3 | |
Tree-based ortholog | 1-to-many | OS03G04060 OS10G39680 OS10G39700 ... | 11 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OS06G51060 OS06G51050 OS03G30470 | 3 | ||
Physcomitrella patens | Orthologous gene family | 1-to-many | PP00134G00580 PP00178G00070 PP00309G00400 | 3 | |
Tree-based ortholog | 1-to-many | PP00133G00180 PP00306G00090 PP00305G00070 ... | 12 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00305G00070 PP00306G00090 PP00133G00180 | 3 | ||
Populus trichocarpa | Orthologous gene family | 1-to-many | PT04G18200 PT09G14170 | 2 | |
Tree-based ortholog | 1-to-many | PT00G07050 PT09G14220 PT09G14170 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT04G18200 PT09G14170 | 2 | ||
Prunus persica | Orthologous gene family | 1-to-many | PPE_007G19920 PPE_008G19160 | 2 | |
Tree-based ortholog | 1-to-many | PPE_008G19160 PPE_007G19920 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_008G19160 | 1 | ||
Ricinus communis | Orthologous gene family | 1-to-1 | RC29797G00100 | 1 | |
Tree-based ortholog | 1-to-many | RC29797G00100 RC29797G00080 RC29830G00350 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29797G00100 | 1 | ||
Solanum lycopersicum | Orthologous gene family | 1-to-many | SL10G055800 SL10G055810 SL10G055820 ... | 4 | |
Tree-based ortholog | 1-to-many | SL02G082960 SL02G061770 SL10G074360 ... | 11 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | SL10G074440 SL10G055810 SL10G055820 ... | 4 | ||
Solanum tuberosum | Tree-based ortholog | 1-to-many | ST02G026320 ST02G009500 ST10G018960 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST02G009500 | 1 | ||
Thellungiella parvula | Orthologous gene family | 1-to-1 | TP3G10630 | 1 | |
Tree-based ortholog | 1-to-1 | TP3G10630 | 1 | ||
Anchor point | N/A | TP3G10630 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G10630 | 1 | ||
Theobroma cacao | Orthologous gene family | 1-to-many | TC0001G00770 TC0002G04660 | 2 | |
Tree-based ortholog | 1-to-many | TC0002G04660 TC0001G00770 TC0001G00780 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G04660 | 1 | ||
Vitis vinifera | Tree-based ortholog | 1-to-1 | VV00G26750 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV00G26750 | 1 | ||
Zea mays | Orthologous gene family | 1-to-1 | ZM06G09870 | 1 | |
Tree-based ortholog | 1-to-1 | ZM05G16160 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM06G09870 | 1 |