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Integrative Orthology Viewer:
AL3G11920
(Arabidopsis lyrata)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis lyrata | Orthologous gene family | AL3G11920 AL6G05750 | 2 |  |
| Tree-based ortholog | AL3G11920 | 1 | ||
| Anchor point | AL6G05750 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AL3G11920 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00101G01040 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00101G01040 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00101G01040 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G34460 AT3G11520 AT5G06150 | 3 | |
| Tree-based ortholog | 1-to-1 | AT3G11520 | 1 | ||
| Anchor point | 1-to-many | AT3G11520 AT5G06150 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G11520 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-many | BV3G13240 BV3G13250 | 2 | |
| Tree-based ortholog | 1-to-many | BV3G13240 BV3G13250 BV9G18890 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BV3G13240 BV3G13250 | 2 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR02G04250 BR03G02230 BR10G17350 | 3 | |
| Tree-based ortholog | 1-to-1 | BR10G17350 | 1 | ||
| Anchor point | 1-to-many | BR10G17350 BR03G02230 BR02G04250 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR10G17350 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_003G10380 CRU_006G04920 | 2 | |
| Tree-based ortholog | 1-to-1 | CRU_003G10380 | 1 | ||
| Anchor point | 1-to-many | CRU_003G10380 CRU_006G04920 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G10380 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00092G00730 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00092G00730 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00092G00730 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR08G03470 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR03G12650 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL04G05760 | 1 | |
| Tree-based ortholog | 1-to-1 | CL04G05760 | 1 | ||
| Anchor point | 1-to-1 | CL02G22670 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL04G05760 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00138G00300 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00138G00300 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00138G00300 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00036G00820 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00036G00820 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00022G03620 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0011G13890 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0011G13890 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0011G13890 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV2G04260 | 1 | |
| Tree-based ortholog | 1-to-1 | FV2G04260 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G04260 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM03G27910 GM03G27920 GM03G27930 ... | 4 | |
| Tree-based ortholog | 1-to-many | GM03G27930 GM19G30735 GM03G27920 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM03G27910 GM19G30720 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-1 | GR07G35170 | 1 | |
| Tree-based ortholog | 1-to-1 | GR07G35170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR07G35170 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-1 | LJ1G056690 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ1G056690 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G056690 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-1 | MD00G331890 | 1 | |
| Tree-based ortholog | 1-to-1 | MD00G331890 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G331890 | 1 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME12784G00010 ME12784G00020 | 2 | |
| Tree-based ortholog | 1-to-many | ME12784G00020 ME12784G00010 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME12784G00010 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-1 | MT7G089080 | 1 | |
| Tree-based ortholog | 1-to-1 | MT7G089080 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G089080 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS01G17402 OS01G59120 OS05G41390 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OS01G59120 OS05G41390 | 2 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL01G06270 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL01G06270 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00089G00550 PP00271G00070 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00271G00070 PP00089G00550 | 2 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT06G03520 PT16G03300 | 2 | |
| Tree-based ortholog | 1-to-many | PT16G03300 PT06G03520 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT16G03300 PT06G03520 | 2 | ||
| Prunus persica | Tree-based ortholog | 1-to-many | PPE_004G29970 PPE_006G05160 PPE_006G05170 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PPE_006G05160 PPE_006G05170 | 2 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC30180G00110 | 1 | |
| Tree-based ortholog | 1-to-1 | RC30180G00110 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30180G00110 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL10G078330 SL10G080950 | 2 | |
| Tree-based ortholog | 1-to-many | SL10G080950 SL10G078330 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL10G078330 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST10G019790 ST10G027200 | 2 | |
| Tree-based ortholog | 1-to-many | ST10G027200 ST10G019790 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST10G019790 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP3G09760 TP6G36740 | 2 | |
| Tree-based ortholog | 1-to-1 | TP3G09760 | 1 | ||
| Anchor point | 1-to-many | TP3G09760 TP6G36740 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G09760 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0005G12300 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0005G12300 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0005G12300 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV08G03650 VV13G10180 | 2 | |
| Tree-based ortholog | 1-to-many | VV13G10180 VV08G03650 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | VV13G10180 VV08G03650 | 2 | ||
| Zea mays | Tree-based ortholog | 1-to-many | ZM07G06910 ZM04G04200 ZM08G00360 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM08G33310 | 1 |