Integrative Orthology Viewer: AL3G11530 (Arabidopsis lyrata)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | AL3G11530 | 1 | |
Tree-based ortholog | AL3G11530 | 1 | ||
Anchor point | AL6G05140 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AL3G11530 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00007G00020 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ATR_00007G00020 ATR_00021G00300 | 2 | ||
Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT3G11100 | 1 | |
Tree-based ortholog | 1-to-1 | AT3G11100 | 1 | ||
Anchor point | 1-to-many | AT3G11100 AT5G05550 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G11100 | 1 | ||
Beta vulgaris | Tree-based ortholog | 1-to-1 | BV7G02450 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV2G04040 | 1 | ||
Brassica rapa | Orthologous gene family | 1-to-many | BR01G37990 BR05G31410 | 2 | |
Tree-based ortholog | 1-to-many | BR05G31410 BR01G37990 | 2 | ||
Anchor point | 1-to-many | BR10G23850 BR05G31410 BR01G37990 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BR05G31410 BR01G37990 | 2 | ||
Capsella rubella | Orthologous gene family | 1-to-1 | CRU_003G09940 | 1 | |
Tree-based ortholog | 1-to-1 | CRU_003G09940 | 1 | ||
Anchor point | 1-to-many | CRU_006G04340 CRU_003G09940 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G09940 | 1 | ||
Carica papaya | Tree-based ortholog | 1-to-1 | CP00019G01510 | 1 | |
Anchor point | 1-to-1 | CP00019G01510 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00019G01510 | 1 | ||
Citrullus lanatus | Tree-based ortholog | 1-to-1 | CL09G00920 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CL01G23860 CL03G07440 | 2 | ||
Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00021G00350 | 1 | |
Anchor point | 1-to-1 | CS00021G00350 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00021G00350 | 1 | ||
Cucumis melo | Tree-based ortholog | 1-to-1 | CM00067G01090 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00067G01090 | 1 | ||
Eucalyptus grandis | Tree-based ortholog | 1-to-1 | EG0010G22690 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0010G25500 | 1 | ||
Fragaria vesca | Tree-based ortholog | 1-to-1 | FV7G29830 | 1 | |
Anchor point | 1-to-1 | FV7G29830 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G29830 | 1 | ||
Glycine max | Tree-based ortholog | 1-to-many | GM16G01370 GM07G04790 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM07G04790 GM16G01370 | 2 | ||
Gossypium raimondii | Tree-based ortholog | 1-to-many | GR09G14480 GR10G23570 | 2 | |
Anchor point | 1-to-1 | GR13G01700 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR09G14480 | 1 | ||
Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ3G036020 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G036020 | 1 | ||
Malus domestica | Tree-based ortholog | 1-to-many | MD04G002120 MD01G015010 | 2 | |
Anchor point | 1-to-1 | MD01G015010 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD04G002120 MD01G015010 | 2 | ||
Manihot esculenta | Tree-based ortholog | 1-to-1 | ME00435G00090 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME00435G00090 | 1 | ||
Medicago truncatula | Tree-based ortholog | 1-to-1 | MT8G022290 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT8G022290 | 1 | ||
Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS02G35690 OS04G36790 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS04G36790 | 1 | ||
Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00407G00120 PP00407G00050 PP00039G01150 ... | 13 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00065G01130 | 1 | ||
Populus trichocarpa | Tree-based ortholog | 1-to-many | PT10G18620 PT08G07130 | 2 | |
Anchor point | 1-to-many | PT10G18620 PT08G07130 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT08G07130 | 1 | ||
Prunus persica | Tree-based ortholog | 1-to-1 | PPE_002G24320 | 1 | |
Anchor point | 1-to-1 | PPE_002G24320 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G24320 | 1 | ||
Ricinus communis | Tree-based ortholog | 1-to-1 | RC29814G00270 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29814G00270 | 1 | ||
Solanum lycopersicum | Tree-based ortholog | 1-to-1 | SL06G051120 | 1 | |
Anchor point | 1-to-1 | SL06G051120 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL06G051120 | 1 | ||
Solanum tuberosum | Tree-based ortholog | 1-to-1 | ST06G011410 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST06G011410 | 1 | ||
Thellungiella parvula | Orthologous gene family | 1-to-1 | TP3G09420 | 1 | |
Tree-based ortholog | 1-to-1 | TP3G09420 | 1 | ||
Anchor point | 1-to-many | TP6G37320 TP3G09420 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G09420 | 1 | ||
Theobroma cacao | Tree-based ortholog | 1-to-1 | TC0010G01240 | 1 | |
Anchor point | 1-to-1 | TC0010G01240 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0010G01240 | 1 | ||
Vitis vinifera | Tree-based ortholog | 1-to-1 | VV13G10170 | 1 | |
Anchor point | 1-to-1 | VV13G10170 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV08G06810 | 1 | ||
Zea mays | Tree-based ortholog | 1-to-many | ZM05G31250 ZM08G19250 ZM02G14140 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM10G17410 ZM02G14140 | 2 |