Integrative Orthology Viewer: AL3G11200 (Arabidopsis lyrata)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | AL3G11200 AL5G26880 | 2 | |
Tree-based ortholog | AL3G11200 | 1 | ||
Anchor point | AL5G26880 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AL3G11200 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00038G00840 ATR_00157G00200 | 2 | |
Tree-based ortholog | 1-to-1 | ATR_00038G00840 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ATR_00157G00200 ATR_00038G00840 | 2 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT3G10810 AT3G56590 | 2 | |
Tree-based ortholog | 1-to-1 | AT3G10810 | 1 | ||
Anchor point | 1-to-1 | AT3G10810 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G10810 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV3G13620 | 1 | |
Tree-based ortholog | 1-to-1 | BV3G13620 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV3G13620 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-1 | BR04G03370 | 1 | |
Tree-based ortholog | 1-to-1 | BR01G38160 | 1 | ||
Anchor point | 1-to-many | BR09G37230 BR01G38160 BR04G03370 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR01G38160 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_003G09610 CRU_005G22030 | 2 | |
Tree-based ortholog | 1-to-1 | CRU_003G09610 | 1 | ||
Anchor point | 1-to-many | CRU_005G22030 CRU_003G09610 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G09610 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00092G00610 | 1 | |
Tree-based ortholog | 1-to-1 | CP00092G00610 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00092G00610 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR13G04340 | 1 | |
Citrullus lanatus | Orthologous gene family | many-to-many | CL04G05880 CL10G14360 | 2 | |
Tree-based ortholog | 1-to-1 | CL10G14360 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL10G14360 | 1 | ||
Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00678G00080 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00678G00080 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00036G01030 | 1 | |
Tree-based ortholog | 1-to-1 | CM00011G06890 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00036G01030 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0011G13980 | 1 | |
Tree-based ortholog | 1-to-1 | EG0011G13980 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0011G13980 | 1 | ||
Fragaria vesca | Tree-based ortholog | 1-to-1 | FV0G51540 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G33860 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM02G22730 GM10G19700 GM10G19710 | 3 | |
Tree-based ortholog | 1-to-many | GM10G19710 GM02G22730 GM10G19700 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM10G19700 GM02G22730 GM10G19710 | 3 | ||
Gossypium raimondii | Orthologous gene family | many-to-1 | GR07G35130 | 1 | |
Tree-based ortholog | 1-to-1 | GR07G35130 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR07G35130 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ1G056370 | 1 | |
Tree-based ortholog | 1-to-1 | LJ1G056370 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G056370 | 1 | ||
Malus domestica | Tree-based ortholog | 1-to-many | MD00G453750 MD15G035220 MD08G021620 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD08G021620 MD15G035220 MD00G453750 | 3 | ||
Manihot esculenta | Orthologous gene family | many-to-1 | ME11297G00460 | 1 | |
Tree-based ortholog | 1-to-1 | ME11297G00460 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME11297G00460 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT7G088720 | 1 | |
Tree-based ortholog | 1-to-1 | MT7G088720 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G088720 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS01G71220 | 1 | |
Tree-based ortholog | 1-to-many | OS01G71220 OS05G30990 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G71220 | 1 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL10G02390 | 1 | |
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00223G00770 PP00037G00500 PP00161G00410 | 3 | |
Populus trichocarpa | Orthologous gene family | many-to-many | PT06G03180 PT16G02900 | 2 | |
Tree-based ortholog | 1-to-many | PT06G03180 PT16G02900 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT16G02900 PT06G03180 | 2 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_007G01070 | 1 | |
Tree-based ortholog | 1-to-1 | PPE_007G01070 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_007G01070 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC27732G00070 | 1 | |
Tree-based ortholog | 1-to-many | RC27732G00080 RC27732G00070 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC27732G00080 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL10G078160 SL10G081010 | 2 | |
Tree-based ortholog | 1-to-many | SL10G078160 SL10G081010 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL10G081010 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST10G019570 ST10G027130 | 2 | |
Tree-based ortholog | 1-to-many | ST10G019570 ST10G027130 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST10G027130 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP3G09130 TP5G05970 | 2 | |
Tree-based ortholog | 1-to-1 | TP3G09130 | 1 | ||
Anchor point | 1-to-1 | TP3G09130 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G09130 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0005G11950 | 1 | |
Tree-based ortholog | 1-to-1 | TC0005G11950 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0005G11950 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV08G03930 | 1 | |
Tree-based ortholog | 1-to-1 | VV08G03930 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV08G03930 | 1 | ||
Zea mays | Orthologous gene family | many-to-1 | ZM03G21500 | 1 | |
Tree-based ortholog | 1-to-1 | ZM03G21500 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM03G21500 | 1 |