Integrative Orthology Viewer: AL3G09530 (Arabidopsis lyrata)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | AL0G10970 AL2G27760 AL3G09520 ... | 5 | |
Tree-based ortholog | AL3G09520 AL3G09530 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | AL3G09520 AL3G09530 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00004G00750 | 1 | |
Tree-based ortholog | many-to-1 | ATR_00004G00750 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00012G01450 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT2G01280 AT2G45100 AT3G09360 | 3 | |
Tree-based ortholog | many-to-1 | AT3G09360 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT3G09370 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV3G10370 | 1 | |
Tree-based ortholog | many-to-1 | BV3G02130 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV5G20730 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR03G31580 BR03G31590 | 2 | |
Tree-based ortholog | many-to-many | BR03G31580 BR03G31590 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | BR03G31590 BR03G31580 | 2 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_002G09520 CRU_003G08100 | 2 | |
Tree-based ortholog | many-to-1 | CRU_003G08100 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_003G08110 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP27574G00010 | 1 | |
Tree-based ortholog | many-to-1 | CP27574G00010 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP27574G00010 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR06G01830 | 1 | |
Tree-based ortholog | many-to-1 | CR06G01830 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR06G01830 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL03G16280 | 1 | |
Tree-based ortholog | many-to-1 | CL11G09890 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL03G16280 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00029G01170 | 1 | |
Tree-based ortholog | many-to-1 | CS00029G01170 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00029G01170 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00025G01440 | 1 | |
Tree-based ortholog | many-to-1 | CM00025G01440 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00011G01810 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0001G17880 | 1 | |
Tree-based ortholog | many-to-1 | EG0001G17880 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0001G17880 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV4G09250 FV5G25500 | 2 | |
Tree-based ortholog | many-to-many | FV4G09250 FV7G14410 FV5G25500 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | FV4G09250 FV5G25500 | 2 | ||
Glycine max | Orthologous gene family | many-to-many | GM16G03973 GM19G29580 | 2 | |
Tree-based ortholog | many-to-many | GM16G03973 GM19G29580 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM18G39740 GM07G15820 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR07G18280 GR13G19630 | 2 | |
Tree-based ortholog | many-to-many | GR07G21600 GR01G20500 GR13G19630 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GR13G19630 GR07G18280 | 2 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ4G037240 | 1 | |
Tree-based ortholog | many-to-1 | LJ4G037240 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ4G037240 | 1 | ||
Malus domestica | Tree-based ortholog | many-to-1 | MD09G015870 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD04G009570 MD00G447630 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-1 | ME02431G00100 | 1 | |
Tree-based ortholog | many-to-1 | ME02431G00100 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME02431G00100 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT6G027510 MT7G086730 | 2 | |
Tree-based ortholog | many-to-many | MT6G027510 MT7G086730 MT7G086760 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT6G027510 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS05G23940 | 1 | |
Tree-based ortholog | many-to-1 | OS05G23940 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS05G23940 | 1 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-many | OL13G01570 OL21G01410 | 2 | |
Tree-based ortholog | many-to-many | OL21G01410 OL13G01570 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | OL13G01570 OL21G01410 | 2 | ||
Physcomitrella patens | Orthologous gene family | many-to-1 | PP00122G00020 | 1 | |
Tree-based ortholog | many-to-1 | PP00122G00020 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00122G00020 | 1 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT01G24610 PT09G03910 | 2 | |
Tree-based ortholog | many-to-many | PT09G03910 PT01G24610 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT01G24610 PT09G03910 | 2 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_001G17440 | 1 | |
Tree-based ortholog | many-to-1 | PPE_001G17440 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_006G26290 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC30072G00060 | 1 | |
Tree-based ortholog | many-to-1 | RC30072G00060 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC30072G00060 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL01G088720 | 1 | |
Tree-based ortholog | many-to-1 | SL01G088720 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL01G088720 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST01G028860 | 1 | |
Tree-based ortholog | many-to-many | ST01G028860 ST01G007220 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST01G028860 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G06510 TP3G07740 | 2 | |
Tree-based ortholog | many-to-1 | TP3G07740 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP3G07740 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0005G24100 | 1 | |
Tree-based ortholog | many-to-1 | TC0005G24100 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0005G24100 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV08G05350 | 1 | |
Tree-based ortholog | many-to-1 | VV08G05350 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV08G05350 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM06G29960 ZM08G09530 | 2 | |
Tree-based ortholog | many-to-many | ZM06G29940 ZM09G00530 ZM06G29960 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM06G29960 | 1 |