Integrative Orthology Viewer: AL3G06520 (Arabidopsis lyrata)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | AL3G06520 AL6G18610 | 2 | |
Tree-based ortholog | AL3G06520 | 1 | ||
Anchor point | AL6G18610 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AL3G06520 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00057G02170 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00057G02170 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT3G06410 AT5G18550 | 2 | |
Tree-based ortholog | 1-to-1 | AT3G06410 | 1 | ||
Anchor point | 1-to-many | AT5G18550 AT3G06410 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G06410 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV0G04620 | 1 | |
Tree-based ortholog | 1-to-1 | BV0G04620 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G04620 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR01G40260 BR02G09090 BR02G34330 ... | 6 | |
Tree-based ortholog | 1-to-many | BR03G30420 BR02G34330 BR01G40260 | 3 | ||
Anchor point | 1-to-many | BR03G30420 BR02G34330 BR01G40260 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR03G30420 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_003G05620 CRU_006G16410 | 2 | |
Tree-based ortholog | 1-to-1 | CRU_003G05620 | 1 | ||
Anchor point | 1-to-many | CRU_006G16410 CRU_003G05620 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G05620 | 1 | ||
Carica papaya | Tree-based ortholog | 1-to-1 | CP00009G01800 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00009G01800 | 1 | ||
Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-many | CR12G08610 CR10G09270 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR08G03590 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL05G06650 | 1 | |
Tree-based ortholog | 1-to-1 | CL05G06650 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G06650 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00011G02610 | 1 | |
Tree-based ortholog | 1-to-1 | CS00011G02610 | 1 | ||
Anchor point | 1-to-1 | CS00011G02610 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00011G02610 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00006G07320 | 1 | |
Tree-based ortholog | 1-to-1 | CM00006G07320 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00006G07320 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0002G10540 | 1 | |
Tree-based ortholog | 1-to-1 | EG0002G10540 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G10540 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV4G12320 | 1 | |
Tree-based ortholog | 1-to-1 | FV4G12320 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV4G12320 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM07G37980 GM13G28820 GM15G10230 ... | 4 | |
Tree-based ortholog | 1-to-many | GM15G10230 GM13G28820 GM17G02720 ... | 4 | ||
Anchor point | 1-to-1 | GM17G02720 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM07G37980 GM17G02720 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR02G02700 GR05G05880 GR11G18840 | 3 | |
Tree-based ortholog | 1-to-many | GR02G02700 GR11G18840 GR05G05880 | 3 | ||
Anchor point | 1-to-1 | GR07G13050 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR11G18840 GR02G02700 | 2 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ6G024300 | 1 | |
Tree-based ortholog | 1-to-1 | LJ6G024300 | 1 | ||
Anchor point | 1-to-1 | LJ6G024300 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ6G024300 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G088040 MD16G012610 | 2 | |
Tree-based ortholog | 1-to-many | MD16G012610 MD00G088040 | 2 | ||
Anchor point | 1-to-1 | MD16G012610 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G088040 MD16G012610 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-1 | ME09365G00320 | 1 | |
Tree-based ortholog | 1-to-many | ME01551G03410 ME09365G00320 | 2 | ||
Anchor point | 1-to-many | ME09365G00310 ME04457G01110 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME01551G03410 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT2G019740 MT4G119280 | 2 | |
Tree-based ortholog | 1-to-many | MT2G019740 MT4G119280 | 2 | ||
Anchor point | 1-to-1 | MT2G019740 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT2G019740 | 1 | ||
Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS01G15460 OS01G15350 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G15460 | 1 | ||
Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00006G01460 PP00006G01420 PP00102G00770 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00006G01460 PP00102G00770 PP00006G01420 | 3 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT08G21570 PT10G02250 | 2 | |
Tree-based ortholog | 1-to-many | PT08G21570 PT10G02250 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT10G02250 PT08G21570 | 2 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_001G13170 | 1 | |
Tree-based ortholog | 1-to-1 | PPE_001G13170 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G13170 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC29726G01240 | 1 | |
Tree-based ortholog | 1-to-1 | RC29726G01240 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29726G01240 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL01G067550 | 1 | |
Tree-based ortholog | 1-to-many | SL06G054620 SL01G067550 | 2 | ||
Anchor point | 1-to-1 | SL01G067550 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G067550 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST01G021570 | 1 | |
Tree-based ortholog | 1-to-many | ST06G018370 ST01G021570 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G021570 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP3G05330 TP6G25780 | 2 | |
Tree-based ortholog | 1-to-1 | TP3G05330 | 1 | ||
Anchor point | 1-to-1 | TP3G05330 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G05330 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0001G29150 | 1 | |
Tree-based ortholog | 1-to-1 | TC0004G28200 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0004G28200 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV07G03730 | 1 | |
Tree-based ortholog | 1-to-1 | VV05G03260 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV05G03260 | 1 | ||
Zea mays | Tree-based ortholog | 1-to-many | ZM03G08520 ZM08G01120 ZM03G08510 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM08G01120 ZM03G08520 | 2 |