Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AL3G05100
(Arabidopsis lyrata)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis lyrata | Orthologous gene family | AL3G05100 | 1 |  |
| Tree-based ortholog | AL3G05100 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AL3G05100 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00025G00430 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00025G00430 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00025G00430 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT3G05250 | 1 | |
| Tree-based ortholog | 1-to-1 | AT3G05250 | 1 | ||
| Anchor point | N/A | AT3G05250 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G05250 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV4G04210 | 1 | |
| Anchor point | N/A | BV4G04210 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV4G04210 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-1 | BR05G35030 | 1 | |
| Tree-based ortholog | 1-to-1 | BR09G23870 | 1 | ||
| Anchor point | N/A | BR05G35030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR05G35030 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_003G04340 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_003G04340 | 1 | ||
| Anchor point | N/A | CRU_003G04340 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G04340 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00048G00330 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00048G00330 | 1 | ||
| Anchor point | N/A | CP00048G00330 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00048G00330 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | 1-to-1 | CR03G14270 | 1 | |
| Tree-based ortholog | 1-to-1 | CR03G14270 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL02G16150 | 1 | |
| Tree-based ortholog | 1-to-1 | CL02G16150 | 1 | ||
| Anchor point | N/A | CL02G16150 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL02G16150 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00067G00110 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00067G00110 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00067G00110 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00003G04000 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00003G04000 | 1 | ||
| Anchor point | N/A | CM00003G04000 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00003G04000 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0008G36310 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0008G36310 | 1 | ||
| Anchor point | N/A | EG0008G36310 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0008G36310 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV6G06010 | 1 | |
| Tree-based ortholog | 1-to-1 | FV6G06010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G06010 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM10G29650 GM20G37650 | 2 | |
| Tree-based ortholog | 1-to-many | GM20G37650 GM10G29650 | 2 | ||
| Anchor point | N/A | GM20G37650 GM10G29650 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM20G37650 GM10G29650 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR07G00130 | 1 | |
| Tree-based ortholog | 1-to-1 | GR07G00130 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR07G00130 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-1 | MD04G016950 | 1 | |
| Tree-based ortholog | 1-to-1 | MD05G003580 | 1 | ||
| Anchor point | N/A | MD04G016950 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD04G016950 | 1 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME09319G00010 | 1 | |
| Tree-based ortholog | 1-to-1 | ME09319G00010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME09319G00010 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT1G082740 | 1 | |
| Tree-based ortholog | 1-to-1 | MT1G082740 | 1 | ||
| Anchor point | N/A | MT1G082740 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G082740 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS03G59540 | 1 | |
| Tree-based ortholog | 1-to-1 | OS03G59540 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G59540 | 1 | ||
| Physcomitrella patens | Orthologous gene family | 1-to-1 | PP00376G00030 | 1 | |
| Tree-based ortholog | 1-to-1 | PP00376G00030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00376G00030 | 1 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT05G03480 PT05G03560 | 2 | |
| Tree-based ortholog | 1-to-many | PT05G03560 PT05G03480 | 2 | ||
| Anchor point | N/A | PT05G03480 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT05G03560 PT05G03480 | 2 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_006G33260 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_006G33260 | 1 | ||
| Anchor point | N/A | PPE_006G33260 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G33260 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC30128G01510 | 1 | |
| Tree-based ortholog | 1-to-1 | RC30128G01510 | 1 | ||
| Anchor point | N/A | RC30128G01510 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30128G01510 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL01G098830 | 1 | |
| Tree-based ortholog | 1-to-1 | SL01G098830 | 1 | ||
| Anchor point | N/A | SL01G098830 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G098830 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST01G036530 | 1 | |
| Tree-based ortholog | 1-to-1 | ST01G036530 | 1 | ||
| Anchor point | N/A | ST01G036530 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G036530 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP3G04100 | 1 | |
| Tree-based ortholog | 1-to-1 | TP3G04100 | 1 | ||
| Anchor point | N/A | TP3G04100 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G04100 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0005G30320 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0005G30320 | 1 | ||
| Anchor point | N/A | TC0005G30320 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0005G30320 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV14G00260 | 1 | |
| Tree-based ortholog | 1-to-1 | VV14G00260 | 1 | ||
| Anchor point | N/A | VV14G00260 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV14G00260 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-1 | ZM05G02060 | 1 | |
| Tree-based ortholog | 1-to-1 | ZM05G02060 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM05G02060 | 1 |