Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AL2G24420
(Arabidopsis lyrata)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis lyrata | Orthologous gene family | AL2G24420 | 1 |  |
| Anchor point | AL4G34330 AL6G13630 AL7G18440 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | AL2G24420 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00022G03790 | 1 | |
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT1G75490 | 1 | |
| Anchor point | many-to-many | AT5G18450 AT4G27950 AT4G11140 ... | 10 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G75490 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV1G08400 | 1 | |
| Anchor point | many-to-many | BV1G08400 BV5G06510 BV3G02670 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV1G08400 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-many | BR07G19930 BR07G30780 | 2 | |
| Anchor point | many-to-many | BR03G47480 BR07G17030 BR10G07210 ... | 18 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR07G19930 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_002G21080 | 1 | |
| Anchor point | many-to-many | CRU_004G27960 CRU_003G15700 CRU_008G13150 ... | 9 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_002G21080 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00099G00190 | 1 | |
| Anchor point | many-to-many | CP00002G02600 CP00003G00430 CP00014G01250 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00099G00190 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR16G05640 | 1 | |
| Citrullus lanatus | Orthologous gene family | 1-to-many | CL05G19740 CL08G14420 | 2 | |
| Anchor point | many-to-many | CL05G06640 CL05G19740 CL08G14420 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G19740 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00002G04890 | 1 | |
| Anchor point | many-to-many | CS00009G01860 CS00002G04890 CS00041G00820 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00002G04890 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-many | CM00014G03370 CM01596G05060 | 2 | |
| Anchor point | many-to-many | CM00007G10530 CM00006G07310 CM00014G03370 ... | 6 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM01596G05060 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0006G13020 | 1 | |
| Anchor point | many-to-many | EG0006G13020 EG0002G30090 EG0004G14240 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G13020 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV2G38990 | 1 | |
| Anchor point | many-to-many | FV7G37010 FV3G30950 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G38990 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM04G03070 GM06G03110 | 2 | |
| Anchor point | many-to-many | GM17G37350 GM17G02711 GM18G49761 ... | 18 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM06G03110 GM04G03070 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-many | GR09G19780 GR09G27140 | 2 | |
| Anchor point | many-to-many | GR05G11010 GR09G19780 GR04G03250 ... | 8 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR09G19780 GR09G27140 | 2 | ||
| Lotus japonicus | Orthologous gene family | 1-to-1 | LJ1G029720 | 1 | |
| Anchor point | many-to-1 | LJ1G059080 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G029720 | 1 | ||
| Malus domestica | Anchor point | many-to-many | MD12G015290 MD07G019540 MD09G004150 ... | 8 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD12G015290 MD12G015310 MD00G342480 ... | 6 | ||
| Manihot esculenta | Orthologous gene family | 1-to-many | ME07012G00750 ME09657G00130 | 2 | |
| Anchor point | many-to-many | ME05432G00300 ME01551G03400 ME09657G00130 ... | 6 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME09657G00130 ME07012G00750 | 2 | ||
| Medicago truncatula | Orthologous gene family | 1-to-many | MT1G023170 MT3G112440 | 2 | |
| Anchor point | many-to-many | MT4G082345 MT8G069360 MT1G023170 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G023170 | 1 | ||
| Oryza sativa ssp. japonica | Anchor point | many-to-many | OS03G05590 OS05G49010 OS02G42585 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS08G45110 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00120G00010 PP00081G00240 PP00023G00150 | 3 | |
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT02G02940 PT05G23330 | 2 | |
| Anchor point | many-to-many | PT07G07680 PT01G09240 PT05G08720 ... | 7 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT02G02940 PT05G23330 | 2 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_001G38030 | 1 | |
| Anchor point | many-to-many | PPE_007G08040 PPE_001G38030 PPE_006G01460 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G38030 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC30170G04700 | 1 | |
| Anchor point | many-to-1 | RC30170G04700 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30170G04700 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL04G080910 | 1 | |
| Anchor point | many-to-many | SL02G067020 SL04G080910 SL03G007460 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL04G080910 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST04G034300 | 1 | |
| Anchor point | many-to-many | ST12G021030 ST05G014440 ST02G020740 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST04G034300 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP5G30620 | 1 | |
| Anchor point | many-to-many | TP7G21700 TP5G01780 TP3G15020 ... | 9 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G30620 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0008G03410 | 1 | |
| Anchor point | many-to-many | TC0008G03410 TC0002G18450 TC0003G19260 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0008G03410 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV18G09710 | 1 | |
| Anchor point | many-to-many | VV07G05340 VV06G07580 VV18G09710 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV18G09710 | 1 | ||
| Zea mays | Anchor point | many-to-many | ZM08G10610 ZM01G03740 ZM04G34860 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM09G27590 ZM01G05280 ZM09G27620 | 3 |