Integrative Orthology Viewer: AL2G23550 (Arabidopsis lyrata)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | AL1G19800 AL2G23550 | 2 | |
Tree-based ortholog | AL2G23550 | 1 | ||
Anchor point | AL1G19800 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AL2G23550 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00078G01080 | 1 | |
Tree-based ortholog | 1-to-1 | ATR_00078G01080 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00078G01080 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G18840 AT1G74690 | 2 | |
Tree-based ortholog | 1-to-1 | AT1G74690 | 1 | ||
Anchor point | 1-to-many | AT1G18840 AT1G74690 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G74690 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV3G06170 | 1 | |
Tree-based ortholog | 1-to-1 | BV3G06170 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV3G06170 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR02G22820 BR06G13470 BR08G25840 | 3 | |
Tree-based ortholog | 1-to-1 | BR02G22820 | 1 | ||
Anchor point | 1-to-many | BR06G34820 BR02G30540 BR09G45930 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR02G22820 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G17700 CRU_002G20260 | 2 | |
Tree-based ortholog | 1-to-1 | CRU_002G20260 | 1 | ||
Anchor point | 1-to-many | CRU_001G17700 CRU_002G20260 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_002G20260 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00017G02000 CP33966G00020 | 2 | |
Tree-based ortholog | 1-to-many | CP00017G02000 CP33966G00020 | 2 | ||
Anchor point | 1-to-1 | CP00017G02000 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP33966G00020 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL01G09410 | 1 | |
Tree-based ortholog | 1-to-1 | CL01G09410 | 1 | ||
Anchor point | 1-to-1 | CL01G09410 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL01G09410 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00009G00400 | 1 | |
Tree-based ortholog | 1-to-many | CS10889G00010 CS01031G00010 CS00009G00400 | 3 | ||
Anchor point | 1-to-1 | CS00009G00400 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00009G00400 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00001G03000 | 1 | |
Tree-based ortholog | 1-to-1 | CM00001G03000 | 1 | ||
Anchor point | 1-to-1 | CM00001G03000 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00001G03000 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0002G03890 EG0010G10790 | 2 | |
Tree-based ortholog | 1-to-1 | EG0002G03890 | 1 | ||
Anchor point | 1-to-1 | EG0002G03890 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G03890 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV5G13720 | 1 | |
Tree-based ortholog | 1-to-1 | FV5G13720 | 1 | ||
Anchor point | 1-to-many | FV0G05910 FV5G13720 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV5G13720 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM04G34150 GM05G01240 GM06G20341 ... | 4 | |
Tree-based ortholog | 1-to-many | GM04G34150 GM06G20341 GM17G10660 ... | 4 | ||
Anchor point | 1-to-many | GM04G34150 GM02G02370 GM06G20341 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM05G01240 GM17G10660 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR01G07240 GR07G03580 | 2 | |
Tree-based ortholog | 1-to-many | GR07G03580 GR01G07240 | 2 | ||
Anchor point | 1-to-many | GR13G08270 GR07G03580 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR01G07240 | 1 | ||
Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ2G022160 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G022160 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD06G015520 MD11G009840 | 2 | |
Tree-based ortholog | 1-to-many | MD06G015520 MD11G009840 | 2 | ||
Anchor point | 1-to-many | MD11G009840 MD06G015520 MD13G005140 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD11G009840 MD06G015520 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME08359G02550 ME12794G01890 | 2 | |
Tree-based ortholog | 1-to-many | ME08359G02550 ME12794G01890 | 2 | ||
Anchor point | 1-to-many | ME12794G01890 ME08359G02550 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME12794G01890 ME08359G02550 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT4G108140 | 1 | |
Tree-based ortholog | 1-to-1 | MT4G108140 | 1 | ||
Anchor point | 1-to-1 | MT5G038620 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G108140 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G51840 OS05G45930 | 2 | |
Tree-based ortholog | 1-to-many | OS05G45930 OS01G51840 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS05G45930 | 1 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00244G00090 PP00234G00290 PP00007G00770 ... | 5 | |
Populus trichocarpa | Orthologous gene family | many-to-many | PT12G06990 PT15G06360 | 2 | |
Tree-based ortholog | 1-to-many | PT15G06360 PT12G06990 | 2 | ||
Anchor point | 1-to-many | PT12G06990 PT17G07960 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT12G06990 PT15G06360 | 2 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_005G19370 | 1 | |
Tree-based ortholog | 1-to-1 | PPE_005G19370 | 1 | ||
Anchor point | 1-to-many | PPE_001G28160 PPE_005G19370 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_005G19370 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC30147G07630 | 1 | |
Tree-based ortholog | 1-to-1 | RC30147G07630 | 1 | ||
Anchor point | 1-to-1 | RC29736G00170 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30147G07630 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL02G087760 | 1 | |
Tree-based ortholog | 1-to-1 | SL05G007130 | 1 | ||
Anchor point | 1-to-1 | SL05G007130 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL02G087760 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST02G035090 | 1 | |
Tree-based ortholog | 1-to-1 | ST05G011250 | 1 | ||
Anchor point | 1-to-1 | ST05G011250 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST02G035090 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G16820 TP5G29810 | 2 | |
Tree-based ortholog | 1-to-1 | TP5G29810 | 1 | ||
Anchor point | 1-to-many | TP1G16820 TP5G29810 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G29810 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0003G08350 | 1 | |
Tree-based ortholog | 1-to-1 | TC0003G08350 | 1 | ||
Anchor point | 1-to-many | TC0003G08350 TC0002G35130 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0003G08350 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV14G01720 VV17G04010 | 2 | |
Tree-based ortholog | 1-to-1 | VV17G04010 | 1 | ||
Anchor point | 1-to-many | VV01G12540 VV14G01720 VV17G04010 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV17G04010 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM03G33300 ZM03G33310 ZM06G29650 ... | 4 | |
Tree-based ortholog | 1-to-many | ZM06G29650 ZM08G22080 ZM03G33300 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM06G29650 ZM08G22080 | 2 |