Integrative Orthology Viewer: AL1G50190 (Arabidopsis lyrata)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | AL1G50180 AL1G50190 AL3G13910 ... | 4 | |
Tree-based ortholog | AL1G50190 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AL1G50190 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Tree-based ortholog | 1-to-many | ATR_00159G00110 ATR_00106G00620 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00106G00620 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G55560 AT1G55570 AT3G13390 ... | 5 | |
Tree-based ortholog | 1-to-1 | AT1G55570 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G55570 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV4G14500 BV4G14510 | 2 | |
Tree-based ortholog | 1-to-many | BV4G14510 BV4G14500 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BV4G14510 BV4G14500 | 2 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR02G23600 BR03G33480 BR03G33490 ... | 10 | |
Tree-based ortholog | 1-to-1 | BR06G00360 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR06G00360 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G32400 CRU_001G41970 CRU_001G41980 ... | 6 | |
Tree-based ortholog | 1-to-1 | CRU_001G41980 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G41980 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00006G03930 CP00119G00040 | 2 | |
Tree-based ortholog | 1-to-1 | CP00119G00040 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00119G00040 | 1 | ||
Citrullus lanatus | Tree-based ortholog | 1-to-many | CL04G12680 CL02G24510 CL02G24470 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL02G24500 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00123G00530 | 1 | |
Tree-based ortholog | 1-to-1 | CS00123G00530 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00123G00530 | 1 | ||
Cucumis melo | Tree-based ortholog | 1-to-many | CM00001G00010 CM00022G05660 CM33969G00010 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00022G05660 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0002G29850 EG0010G14940 EG0010G14950 | 3 | |
Tree-based ortholog | 1-to-many | EG0010G14940 EG0002G29850 EG0010G14950 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G29860 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV5G36950 FV6G28670 | 2 | |
Tree-based ortholog | 1-to-many | FV6G28640 FV6G28670 FV3G35640 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G28670 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM07G35170 GM07G35180 GM20G03030 | 3 | |
Tree-based ortholog | 1-to-many | GM07G35170 GM20G03030 GM11G36390 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM11G36390 | 1 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR02G17360 GR08G07300 GR13G24480 ... | 5 | |
Tree-based ortholog | 1-to-many | GR02G17360 GR13G24490 GR13G24470 ... | 8 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR13G24500 GR13G24470 GR02G17360 ... | 5 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ4G014040 LJ4G014070 LJ6G002320 | 3 | |
Tree-based ortholog | 1-to-many | LJ4G014040 LJ6G002320 LJ6G001860 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G014070 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G104730 MD00G104760 MD00G501000 ... | 5 | |
Tree-based ortholog | 1-to-many | MD00G413560 MD00G104760 MD06G009500 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD06G009510 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME04300G00160 ME06582G00900 ME12587G00070 | 3 | |
Tree-based ortholog | 1-to-many | ME04300G00160 ME06582G00890 ME06582G00900 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME06582G00900 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT3G083390 MT3G083400 MT3G083430 ... | 6 | |
Tree-based ortholog | 1-to-many | MT3G083410 MT3G083400 MT3G083390 ... | 8 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G083190 | 1 | ||
Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS05G40740 OS01G60080 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS05G40740 | 1 | ||
Physcomitrella patens | Tree-based ortholog | 1-to-1 | PP00217G00360 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00217G00360 | 1 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT01G00050 PT01G00060 PT03G22410 | 3 | |
Tree-based ortholog | 1-to-many | PT01G00060 PT03G22410 PT03G22420 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT01G00050 PT03G22410 PT01G00060 | 3 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_006G01850 PPE_006G01860 | 2 | |
Tree-based ortholog | 1-to-many | PPE_006G01860 PPE_006G01850 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G01850 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC28842G00070 | 1 | |
Tree-based ortholog | 1-to-many | RC28842G00070 RC28842G00080 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | RC28842G00070 RC28842G00080 | 2 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G005510 SL01G056310 SL11G008860 | 3 | |
Tree-based ortholog | 1-to-many | SL01G056310 SL01G005510 SL05G055710 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL11G008860 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST01G005730 ST01G011080 ST03G010800 ... | 5 | |
Tree-based ortholog | 1-to-many | ST01G011080 ST01G005730 ST12G032780 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST11G009850 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G18140 TP1G31990 TP1G41190 ... | 7 | |
Tree-based ortholog | 1-to-1 | TP1G41200 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G41200 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0009G20310 | 1 | |
Tree-based ortholog | 1-to-many | TC0009G20310 TC0009G20280 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0009G20310 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV00G09560 VV00G13200 | 2 | |
Tree-based ortholog | 1-to-many | VV00G13200 VV00G09560 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | VV00G09560 VV00G13200 | 2 | ||
Zea mays | Tree-based ortholog | 1-to-many | ZM08G18350 ZM06G26960 ZM03G28690 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM03G28690 ZM08G33010 | 2 |