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Integrative Orthology Viewer:
AL1G38700
(Arabidopsis lyrata)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis lyrata | Orthologous gene family | AL1G19690 AL1G38700 AL2G23330 | 3 |  |
| Tree-based ortholog | AL1G38700 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AL1G38700 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00040G00250 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00040G00250 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00040G00250 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G18740 AT1G43630 AT1G74450 | 3 | |
| Tree-based ortholog | 1-to-1 | AT1G43630 | 1 | ||
| Anchor point | N/A | AT1G43630 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G43630 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV1G12680 | 1 | |
| Tree-based ortholog | 1-to-1 | BV1G12680 | 1 | ||
| Anchor point | N/A | BV1G12680 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV1G12680 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR06G13400 BR07G30090 BR08G05300 ... | 5 | |
| Tree-based ortholog | 1-to-1 | BR08G05300 | 1 | ||
| Anchor point | N/A | BR08G05300 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR08G05300 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_001G17600 CRU_001G32900 CRU_002G20030 | 3 | |
| Tree-based ortholog | 1-to-1 | CRU_001G32900 | 1 | ||
| Anchor point | N/A | CRU_001G32900 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G32900 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00021G01980 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00021G01980 | 1 | ||
| Anchor point | N/A | CP00021G01980 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00021G01980 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-many | CL08G06930 CL09G09570 | 2 | |
| Tree-based ortholog | 1-to-many | CL09G09570 CL08G06930 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL08G06930 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00002G00950 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00002G00950 | 1 | ||
| Anchor point | N/A | CS00002G00950 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00002G00950 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00008G02870 CM00065G00180 | 2 | |
| Tree-based ortholog | 1-to-many | CM00065G00180 CM00008G02870 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00008G02870 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0006G22340 | 1 | |
| Tree-based ortholog | 1-to-many | EG0006G22340 EG0003G13330 | 2 | ||
| Anchor point | N/A | EG0006G22340 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G22340 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV2G21860 | 1 | |
| Tree-based ortholog | 1-to-1 | FV2G21860 | 1 | ||
| Anchor point | N/A | FV2G21860 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G21860 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM02G09000 GM16G28170 | 2 | |
| Tree-based ortholog | 1-to-many | GM10G36910 GM20G30700 GM02G09000 ... | 4 | ||
| Anchor point | N/A | GM16G28170 GM10G36910 GM02G09000 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM16G28170 GM02G09000 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR05G07880 GR09G28540 GR13G11110 | 3 | |
| Tree-based ortholog | 1-to-many | GR13G11110 GR05G07880 GR09G28540 | 3 | ||
| Anchor point | N/A | GR05G07880 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR13G11110 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-1 | LJ5G032300 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ5G032300 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ5G032300 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD10G001700 MD15G032120 | 2 | |
| Tree-based ortholog | 1-to-many | MD10G001700 MD15G032120 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD15G032120 MD10G001700 | 2 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME02939G00020 ME07519G00690 | 2 | |
| Tree-based ortholog | 1-to-many | ME07519G00690 ME02939G00020 | 2 | ||
| Anchor point | N/A | ME07519G00690 ME02939G00020 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME07519G00690 ME02939G00020 | 2 | ||
| Medicago truncatula | Orthologous gene family | many-to-1 | MT1G098700 | 1 | |
| Tree-based ortholog | 1-to-many | MT1G098700 MT6G037010 MT6G037060 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G098700 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS12G06780 | 1 | |
| Tree-based ortholog | 1-to-1 | OS04G59140 | 1 | ||
| Anchor point | N/A | OS11G06440 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS12G06780 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00029G00280 PP00166G00230 PP00140G00220 ... | 5 | |
| Populus trichocarpa | Orthologous gene family | many-to-many | PT02G06780 PT05G19260 | 2 | |
| Tree-based ortholog | 1-to-many | PT05G19260 PT02G06780 | 2 | ||
| Anchor point | N/A | PT05G19260 PT02G06780 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT05G19260 PT02G06780 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_008G03280 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_008G03280 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_008G03280 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC29863G00030 | 1 | |
| Tree-based ortholog | 1-to-1 | RC29863G00030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29863G00030 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL04G071480 SL12G056550 | 2 | |
| Tree-based ortholog | 1-to-many | SL12G056550 SL04G071480 | 2 | ||
| Anchor point | N/A | SL04G071480 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL04G071480 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST04G023440 ST12G024850 | 2 | |
| Tree-based ortholog | 1-to-many | ST12G024850 ST04G023440 | 2 | ||
| Anchor point | N/A | ST04G023440 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST04G023440 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP1G16750 TP1G32530 TP5G29620 | 3 | |
| Tree-based ortholog | 1-to-1 | TP1G32530 | 1 | ||
| Anchor point | N/A | TP1G32530 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G32530 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0008G15100 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0008G15100 | 1 | ||
| Anchor point | N/A | TC0008G15100 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0008G15100 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV12G08200 | 1 | |
| Tree-based ortholog | 1-to-1 | VV12G08200 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV12G08200 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM04G34740 ZM10G02610 | 2 | |
| Tree-based ortholog | 1-to-1 | ZM10G27010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM10G02610 | 1 |