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Integrative Orthology Viewer:
AL1G35540
(Arabidopsis lyrata)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis lyrata | Orthologous gene family | AL1G35540 AL1G35840 AL1G36770 ... | 9 |  |
| Tree-based ortholog | AL1G35540 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AL1G35540 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00016G01250 ATR_00057G01250 | 2 | |
| Tree-based ortholog | 1-to-1 | ATR_00021G02090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00057G01250 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G34170 AT1G34310 AT1G34390 ... | 11 | |
| Tree-based ortholog | 1-to-1 | AT1G34170 | 1 | ||
| Anchor point | N/A | AT1G34170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G34170 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV5G14130 | 1 | |
| Tree-based ortholog | 1-to-1 | BV0G72620 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G72620 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR01G13930 BR01G24850 BR03G47630 ... | 8 | |
| Tree-based ortholog | 1-to-many | BR09G16080 BR09G21020 BR06G17670 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR03G47630 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_001G30980 CRU_001G31310 CRU_001G31680 ... | 9 | |
| Tree-based ortholog | 1-to-many | CRU_001G31310 CRU_001G31680 CRU_001G30980 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CRU_001G31310 CRU_001G30980 CRU_001G31680 ... | 4 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP31756G00010 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00015G00010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00096G00410 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-many | CL06G18850 CL07G14550 | 2 | |
| Tree-based ortholog | 1-to-many | CL01G01620 CL07G14550 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL09G08960 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-many | CS00009G02490 CS00187G00180 | 2 | |
| Tree-based ortholog | 1-to-1 | CS00009G02490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00009G02490 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00066G00130 CM00089G00080 | 2 | |
| Tree-based ortholog | 1-to-many | CM00005G07390 CM00027G02160 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00027G02160 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0002G29570 | 1 | |
| Tree-based ortholog | 1-to-many | EG0005G07570 EG0004G14140 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0004G14140 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-many | FV0G09070 FV5G26460 | 2 | |
| Tree-based ortholog | 1-to-1 | FV5G35640 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV5G35640 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM04G37760 GM05G38540 GM06G17320 ... | 4 | |
| Tree-based ortholog | 1-to-many | GM01G25270 GM03G17450 GM18G40180 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM03G17450 GM01G25270 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR01G05460 GR07G04490 GR08G21020 | 3 | |
| Tree-based ortholog | 1-to-many | GR07G02690 GR03G07800 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR03G07800 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-1 | LJ4G044950 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ1G074500 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G074500 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G388180 MD06G011560 MD08G022820 ... | 4 | |
| Tree-based ortholog | 1-to-many | MD02G017300 MD15G013580 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD02G017300 | 1 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME01701G00670 ME02658G00180 ME05501G00020 ... | 5 | |
| Tree-based ortholog | 1-to-1 | ME03175G00490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME03175G00490 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT7G062540 MT8G100050 | 2 | |
| Tree-based ortholog | 1-to-many | MT7G062540 MT4G021580 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G021580 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G13520 OS01G70270 OS12G29520 | 3 | |
| Tree-based ortholog | 1-to-1 | OS01G13520 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G35140 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00316G00110 PP00250G00190 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00014G02180 PP00280G00020 PP00064G00530 ... | 4 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT01G06620 PT03G16360 PT12G10610 ... | 5 | |
| Tree-based ortholog | 1-to-many | PT01G08860 PT03G14210 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT03G14210 PT01G08860 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_005G15050 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_005G13160 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_005G13160 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-many | RC29609G00130 RC30128G04460 RC30147G03230 | 3 | |
| Tree-based ortholog | 1-to-1 | RC30068G00060 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30068G00060 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G096070 SL03G118290 SL12G042070 | 3 | |
| Tree-based ortholog | 1-to-many | SL05G056040 SL08G008380 SL08G082630 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL08G008380 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST03G031730 ST12G020960 | 2 | |
| Tree-based ortholog | 1-to-many | ST05G029230 ST08G009400 ST08G027630 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST08G009400 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP2G04790 TP2G25180 TP4G04480 ... | 6 | |
| Tree-based ortholog | 1-to-many | TP6G06600 TP6G08230 TP6G08360 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP4G04480 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-many | TC0002G18900 TC0003G14100 | 2 | |
| Tree-based ortholog | 1-to-1 | TC0003G29650 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0003G29650 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV01G01910 VV17G08950 | 2 | |
| Tree-based ortholog | 1-to-1 | VV02G04870 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV02G04870 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM03G22200 ZM04G05650 ZM04G16600 ... | 6 | |
| Tree-based ortholog | 1-to-1 | ZM03G00350 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM02G14530 | 1 |