Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AL1G27340
(Arabidopsis lyrata)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis lyrata | Orthologous gene family | AL1G27340 | 1 |  |
| Tree-based ortholog | AL1G27340 | 1 | ||
| Anchor point | AL2G17300 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AL1G27340 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-many | ATR_00049G00960 ATR_00006G01420 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00006G01420 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT1G26300 | 1 | |
| Tree-based ortholog | 1-to-1 | AT1G26300 | 1 | ||
| Anchor point | 1-to-many | AT1G26300 AT1G69030 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G26300 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-1 | BV5G17650 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV5G17650 | 1 | ||
| Brassica rapa | Tree-based ortholog | 1-to-1 | BR02G19590 | 1 | |
| Anchor point | 1-to-1 | BR02G19590 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR02G19590 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_002G14700 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_002G14700 | 1 | ||
| Anchor point | 1-to-1 | CRU_002G14700 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_002G14700 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00289G00040 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00289G00040 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00289G00040 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR06G11360 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR06G11360 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL05G24560 | 1 | |
| Tree-based ortholog | 1-to-1 | CL05G24560 | 1 | ||
| Anchor point | 1-to-1 | CL05G24560 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G24560 | 1 | ||
| Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00019G01560 | 1 | |
| Anchor point | 1-to-1 | CS00019G01560 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00030G00600 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00016G05020 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00016G05020 | 1 | ||
| Anchor point | 1-to-1 | CM00016G05020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00016G05020 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0007G18560 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0007G18560 | 1 | ||
| Anchor point | 1-to-1 | EG0007G18560 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0007G18560 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV0G03410 | 1 | |
| Tree-based ortholog | 1-to-1 | FV0G03410 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G03410 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM01G08580 GM02G13590 | 2 | |
| Tree-based ortholog | 1-to-many | GM02G13590 GM01G08580 | 2 | ||
| Anchor point | 1-to-many | GM01G08580 GM02G13590 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM01G08580 GM02G13590 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-many | GR08G17530 GR13G09760 | 2 | |
| Tree-based ortholog | 1-to-many | GR13G09760 GR08G17530 | 2 | ||
| Anchor point | 1-to-many | GR13G09760 GR08G17530 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR13G09760 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-1 | MD16G002520 | 1 | |
| Tree-based ortholog | 1-to-1 | MD16G002520 | 1 | ||
| Anchor point | 1-to-1 | MD16G002520 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD16G002520 | 1 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME06656G00650 | 1 | |
| Tree-based ortholog | 1-to-many | ME06656G00650 ME08359G01170 | 2 | ||
| Anchor point | 1-to-1 | ME06656G00650 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME06656G00650 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT5G048180 | 1 | |
| Tree-based ortholog | 1-to-1 | MT5G048180 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT5G048180 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-1 | OS02G49450 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G49450 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00070G00650 PP00160G00200 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00160G00200 PP00070G00650 | 2 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT08G11190 PT10G13790 | 2 | |
| Tree-based ortholog | 1-to-many | PT10G13790 PT08G11190 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT08G11190 PT10G13790 | 2 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_001G30530 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_001G30530 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G30530 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC30138G00730 | 1 | |
| Tree-based ortholog | 1-to-1 | RC30138G00730 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30138G00730 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-many | SL03G114740 SL12G038630 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL12G038630 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | 1-to-many | ST03G028280 ST12G017340 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST12G017340 | 1 | ||
| Thellungiella parvula | Tree-based ortholog | 1-to-1 | TP5G24140 | 1 | |
| Anchor point | 1-to-1 | TP5G24140 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G24140 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0002G32180 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0002G32180 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G32180 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-1 | VV17G05020 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV17G05020 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-many | ZM05G39110 ZM04G23270 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM05G39110 ZM04G23270 | 2 |