Integrative Orthology Viewer: AL1G20660 (Arabidopsis lyrata)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | AL1G20660 AL1G50310 AL2G24250 ... | 10 | |
Tree-based ortholog | AL1G20660 | 1 | ||
Anchor point | AL7G01090 AL8G21610 AL7G04360 ... | 7 | ||
Best-Hits-and-Inparalogs(BHI)family | AL1G20660 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00014G00460 ATR_00014G00470 ATR_00061G00560 ... | 4 | |
Tree-based ortholog | 1-to-many | ATR_00106G00790 ATR_00061G00560 ATR_00089G00350 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00014G00470 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G19650 AT1G75370 AT2G16380 ... | 11 | |
Tree-based ortholog | 1-to-1 | AT1G19650 | 1 | ||
Anchor point | many-to-many | AT4G34580 AT1G19650 AT4G39170 ... | 9 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G19650 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV1G08940 BV6G16080 BV9G13150 ... | 4 | |
Tree-based ortholog | 1-to-many | BV8G13210 BV7G14780 | 2 | ||
Anchor point | many-to-many | BV1G08940 BV9G13150 BV6G16080 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV9G13150 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR01G03580 BR03G39770 BR03G54280 ... | 12 | |
Tree-based ortholog | 1-to-1 | BR06G14110 | 1 | ||
Anchor point | many-to-many | BR08G20020 BR03G54280 BR03G12290 ... | 10 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR06G14110 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G18390 CRU_002G20970 CRU_003G29010 ... | 10 | |
Tree-based ortholog | 1-to-1 | CRU_001G18390 | 1 | ||
Anchor point | many-to-many | CRU_007G03590 CRU_003G31080 CRU_002G20970 ... | 9 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G18390 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00006G01670 CP00012G00780 CP00099G00370 ... | 4 | |
Tree-based ortholog | 1-to-1 | CP00099G00370 | 1 | ||
Anchor point | many-to-many | CP00006G01670 CP00099G00370 CP00106G00090 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00099G00370 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR12G09670 | 1 | |
Tree-based ortholog | 1-to-many | CR10G05730 CR02G11750 CR12G09670 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CR10G05730 CR02G11750 CR12G09670 | 3 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL01G20030 CL09G22000 CL11G14710 ... | 4 | |
Tree-based ortholog | 1-to-many | CL09G22000 CL09G08470 | 2 | ||
Anchor point | many-to-many | CL01G20030 CL11G14710 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL11G14720 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00002G04590 CS00013G02680 CS00017G00300 ... | 4 | |
Tree-based ortholog | 1-to-1 | CS00002G04590 | 1 | ||
Anchor point | many-to-many | CS00017G00300 CS00287G00080 CS00002G04590 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00287G00080 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00007G08970 CM00019G01290 CM00046G00400 ... | 5 | |
Tree-based ortholog | 1-to-many | CM00021G02610 CM00019G01290 CM00046G00390 | 3 | ||
Anchor point | many-to-many | CM00059G01340 CM00007G08970 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00059G01350 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0006G12900 EG0006G15250 EG0006G15260 ... | 7 | |
Tree-based ortholog | 1-to-many | EG0006G15260 EG0006G15250 | 2 | ||
Anchor point | many-to-many | EG0009G10300 EG0006G12900 EG0007G12040 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G12900 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV1G05420 FV1G14700 FV2G00690 ... | 7 | |
Tree-based ortholog | 1-to-1 | FV2G50480 | 1 | ||
Anchor point | many-to-many | FV2G50480 FV2G00690 FV1G14700 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G50480 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM01G37640 GM02G05980 GM04G01220 ... | 22 | |
Tree-based ortholog | 1-to-many | GM17G37150 GM14G07850 GM04G03230 ... | 4 | ||
Anchor point | many-to-many | GM11G07661 GM04G03230 GM11G12260 ... | 12 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM17G37150 GM14G07850 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR03G01300 GR05G10920 GR05G24550 ... | 13 | |
Tree-based ortholog | 1-to-many | GR05G10920 GR09G19980 | 2 | ||
Anchor point | many-to-many | GR13G03530 GR03G01300 GR05G10920 ... | 9 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR13G03530 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ1G043470 LJ1G043480 LJ2G030170 ... | 7 | |
Tree-based ortholog | 1-to-1 | LJ5G002050 | 1 | ||
Anchor point | many-to-many | LJ1G043470 LJ3G047330 LJ5G002050 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G043470 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G099910 MD00G184230 MD00G311530 ... | 13 | |
Tree-based ortholog | 1-to-many | MD00G311530 MD08G001670 | 2 | ||
Anchor point | many-to-many | MD11G018760 MD08G001670 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD08G002160 MD00G517180 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME01441G00120 ME06512G00460 ME06801G00030 ... | 10 | |
Tree-based ortholog | 1-to-many | ME07012G00860 ME10524G00080 | 2 | ||
Anchor point | many-to-many | ME06512G00460 ME08122G00100 ME07520G02040 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME07012G00860 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT1G022480 MT3G010190 MT3G112150 ... | 11 | |
Tree-based ortholog | 1-to-many | MT1G022480 MT3G112150 | 2 | ||
Anchor point | many-to-many | MT3G117090 MT3G112150 MT4G070720 ... | 7 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G117100 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G50616 OS02G04020 OS02G04030 ... | 10 | |
Tree-based ortholog | 1-to-many | OS01G50616 OS05G46720 OS02G04020 ... | 8 | ||
Anchor point | many-to-many | OS01G50616 OS02G04020 OS05G46720 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G04020 | 1 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL05G00720 | 1 | |
Tree-based ortholog | 1-to-1 | OL05G01120 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL05G00720 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00088G00360 PP00169G00420 PP00307G00110 | 3 | |
Tree-based ortholog | 1-to-many | PP00099G00520 PP00024G00540 PP00307G00110 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00169G00420 PP00088G00360 PP00307G00110 | 3 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT01G47130 PT02G03260 PT04G15760 ... | 10 | |
Tree-based ortholog | 1-to-many | PT05G23050 PT02G03260 | 2 | ||
Anchor point | many-to-many | PT09G11940 PT05G23050 PT05G11970 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT05G23050 PT02G03260 | 2 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_001G38330 PPE_006G03950 PPE_007G18090 ... | 8 | |
Tree-based ortholog | 1-to-1 | PPE_001G38330 | 1 | ||
Anchor point | many-to-many | PPE_007G18090 PPE_001G38330 PPE_008G11000 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_008G11000 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC28657G00260 RC29634G00270 RC30131G02240 ... | 6 | |
Tree-based ortholog | 1-to-1 | RC30170G04360 | 1 | ||
Anchor point | many-to-many | RC30131G02240 RC29634G00270 RC30170G04360 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30170G04360 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G109860 SL01G109870 SL07G066090 ... | 7 | |
Tree-based ortholog | 1-to-many | SL08G078680 SL10G005740 SL07G066090 ... | 5 | ||
Anchor point | many-to-many | SL04G080690 SL01G109860 SL10G053900 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G109870 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST01G047280 ST01G047290 ST07G027760 ... | 5 | |
Tree-based ortholog | 1-to-many | ST10G005860 ST07G027760 ST09G017890 | 3 | ||
Anchor point | many-to-1 | ST01G047280 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G047290 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G17490 TP1G41300 TP3G29610 ... | 10 | |
Tree-based ortholog | 1-to-1 | TP1G17490 | 1 | ||
Anchor point | many-to-many | TP7G34120 TP3G31610 TP1G17490 ... | 9 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G17490 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0001G02680 TC0002G07700 TC0002G07710 ... | 5 | |
Tree-based ortholog | 1-to-1 | TC0008G03070 | 1 | ||
Anchor point | many-to-many | TC0001G02680 TC0002G07700 TC0008G03070 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G07700 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV03G02830 VV03G02840 VV04G01590 ... | 6 | |
Tree-based ortholog | 1-to-1 | VV18G09350 | 1 | ||
Anchor point | many-to-many | VV03G02840 VV04G01590 VV18G09350 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | VV03G02840 VV18G09350 | 2 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G31480 ZM02G32470 ZM04G12010 ... | 14 | |
Tree-based ortholog | 1-to-many | ZM08G26210 ZM08G09820 ZM06G30070 ... | 17 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM05G18830 | 1 |