Integrative Orthology Viewer: AL1G17980 (Arabidopsis lyrata)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | AL1G17980 AL4G20270 AL7G21580 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | AL1G17980 | 1 | ||
Tree-based ortholog | AL1G17980 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00035G00060 ATR_00092G00200 ATR_00092G00210 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00035G00060 | 1 | ||
Tree-based ortholog | 1-to-1 | ATR_00035G00060 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G17120 AT2G34960 AT4G21120 | 3 | |
Anchor point | N/A | AT1G17120 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G17120 | 1 | ||
Tree-based ortholog | 1-to-1 | AT1G17120 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV0G20830 BV0G42920 BV0G79400 ... | 4 | |
Anchor point | N/A | BV0G79400 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G79400 | 1 | ||
Tree-based ortholog | 1-to-1 | BV0G79400 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR03G45670 BR04G20790 BR08G12570 ... | 4 | |
Anchor point | N/A | BR09G46810 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G46810 | 1 | ||
Tree-based ortholog | 1-to-1 | BR09G46810 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G16090 CRU_004G16090 CRU_007G19350 | 3 | |
Anchor point | N/A | CRU_001G16090 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G16090 | 1 | ||
Tree-based ortholog | 1-to-1 | CRU_001G16090 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00017G00710 CP00030G00820 CP00077G00920 ... | 4 | |
Anchor point | N/A | CP00077G00920 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00077G00920 | 1 | ||
Tree-based ortholog | 1-to-1 | CP00077G00920 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR01G08910 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR01G08910 | 1 | ||
Tree-based ortholog | 1-to-many | CR01G08910 CR07G04220 | 2 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL03G04040 CL03G06020 CL07G15070 ... | 4 | |
Anchor point | N/A | CL07G15070 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL07G15070 | 1 | ||
Tree-based ortholog | 1-to-1 | CL07G15070 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00008G01620 CS00010G00510 CS00010G00520 ... | 4 | |
Anchor point | N/A | CS00370G00050 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00370G00050 | 1 | ||
Tree-based ortholog | 1-to-1 | CS00370G00050 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00001G05000 CM00001G09330 CM00027G00910 ... | 4 | |
Anchor point | N/A | CM00027G00910 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00027G00910 | 1 | ||
Tree-based ortholog | 1-to-1 | CM00027G00910 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0004G00090 EG0004G01340 EG0004G01350 ... | 9 | |
Anchor point | N/A | EG0006G27130 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0006G27130 EG0006G27140 | 2 | ||
Tree-based ortholog | 1-to-many | EG0006G27140 EG0006G27130 | 2 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV3G11510 FV3G15160 FV3G15170 ... | 5 | |
Anchor point | N/A | FV5G40250 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV5G40250 | 1 | ||
Tree-based ortholog | 1-to-many | FV5G40250 FV5G40300 | 2 | ||
Glycine max | Orthologous gene family | many-to-many | GM05G30510 GM08G13640 GM08G13655 ... | 8 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM09G01230 | 1 | ||
Tree-based ortholog | 1-to-1 | GM09G01230 | 1 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR02G16270 GR05G26650 GR08G05120 ... | 5 | |
Anchor point | N/A | GR13G17680 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR13G17680 | 1 | ||
Tree-based ortholog | 1-to-1 | GR13G17680 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ1G004970 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G004970 | 1 | ||
Tree-based ortholog | 1-to-many | LJ1G036800 LJ1G036770 LJ1G055100 ... | 5 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G190370 MD00G190990 MD05G009430 ... | 8 | |
Anchor point | N/A | MD10G015540 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G190990 | 1 | ||
Tree-based ortholog | 1-to-many | MD00G190990 MD10G015540 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME03264G00010 ME03604G00020 ME07891G00030 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME12235G00030 | 1 | ||
Tree-based ortholog | 1-to-1 | ME12235G00030 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT1G030660 MT2G035430 MT6G034535 ... | 7 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT8G461380 | 1 | ||
Tree-based ortholog | 1-to-many | MT6G034535 MT8G461380 | 2 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G11160 OS03G43970 OS06G34830 ... | 4 | |
Anchor point | N/A | OS12G41890 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G11160 | 1 | ||
Tree-based ortholog | 1-to-1 | OS06G34830 | 1 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL14G00150 | 1 | |
Tree-based ortholog | 1-to-1 | OL14G00150 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00009G01350 PP00049G00750 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00049G00750 PP00009G01350 | 2 | ||
Tree-based ortholog | 1-to-many | PP00049G00750 PP00009G01350 | 2 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT01G07610 PT01G37850 PT03G15460 ... | 6 | |
Anchor point | N/A | PT01G37850 PT01G15070 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT01G37850 | 1 | ||
Tree-based ortholog | 1-to-1 | PT01G37850 | 1 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_004G08480 PPE_004G08490 PPE_004G11250 ... | 5 | |
Anchor point | N/A | PPE_004G14310 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_004G14310 | 1 | ||
Tree-based ortholog | 1-to-1 | PPE_004G14310 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29801G01580 RC29932G00190 RC29932G00200 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29801G01580 | 1 | ||
Tree-based ortholog | 1-to-1 | RC29801G01580 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL02G070270 SL02G070280 SL02G081850 ... | 5 | |
Anchor point | N/A | SL12G011370 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL12G011370 | 1 | ||
Tree-based ortholog | 1-to-1 | SL12G011370 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST02G016630 ST02G016650 ST02G025160 ... | 5 | |
Anchor point | N/A | ST12G006310 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST12G006310 | 1 | ||
Tree-based ortholog | 1-to-1 | ST12G006310 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G15240 TP3G08910 TP4G17250 ... | 4 | |
Anchor point | N/A | TP1G15240 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G15240 | 1 | ||
Tree-based ortholog | 1-to-1 | TP1G15240 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0002G00280 TC0002G01120 TC0002G01130 ... | 4 | |
Anchor point | N/A | TC0007G13640 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0007G13640 | 1 | ||
Tree-based ortholog | 1-to-1 | TC0007G13640 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV01G08310 VV01G09870 VV10G05200 ... | 5 | |
Anchor point | N/A | VV19G00250 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | VV01G08310 VV19G00250 | 2 | ||
Tree-based ortholog | 1-to-many | VV19G00250 VV01G08310 | 2 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G46600 ZM03G01400 ZM03G16500 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM06G15030 | 1 | ||
Tree-based ortholog | 1-to-1 | ZM06G15030 | 1 |