Integrative Orthology Viewer: AL1G17330 (Arabidopsis lyrata)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | AL1G17330 AL2G28250 | 2 | |
Tree-based ortholog | AL1G17330 | 1 | ||
Anchor point | AL2G28250 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AL1G17330 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00032G00080 | 1 | |
Tree-based ortholog | 1-to-1 | ATR_00032G00080 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00032G00080 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G16460 AT1G79230 | 2 | |
Tree-based ortholog | 1-to-1 | AT1G16460 | 1 | ||
Anchor point | 1-to-many | AT1G79230 AT1G16460 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G16460 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV2G00160 | 1 | |
Tree-based ortholog | 1-to-1 | BV2G00160 | 1 | ||
Anchor point | 1-to-1 | BV2G00160 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV2G00160 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR06G11610 BR07G18580 BR07G33830 | 3 | |
Tree-based ortholog | 1-to-1 | BR06G11610 | 1 | ||
Anchor point | 1-to-many | BR02G25220 BR07G18580 BR07G33830 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR07G33830 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G15480 CRU_002G24680 | 2 | |
Tree-based ortholog | 1-to-1 | CRU_001G15480 | 1 | ||
Anchor point | 1-to-many | CRU_001G15480 CRU_002G24680 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G15480 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00034G00160 | 1 | |
Tree-based ortholog | 1-to-many | CP00034G00160 CP00034G00150 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00034G00160 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR13G07960 | 1 | |
Tree-based ortholog | 1-to-many | CR01G02070 CR13G07960 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR13G07960 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL05G11070 | 1 | |
Tree-based ortholog | 1-to-1 | CL05G11070 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G11070 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00052G00670 | 1 | |
Tree-based ortholog | 1-to-1 | CS00052G00670 | 1 | ||
Anchor point | 1-to-1 | CS00052G00670 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00052G00670 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00038G01250 | 1 | |
Tree-based ortholog | 1-to-1 | CM00038G01250 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00038G01250 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0006G38200 | 1 | |
Tree-based ortholog | 1-to-1 | EG0006G38200 | 1 | ||
Anchor point | 1-to-1 | EG0006G38200 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G38200 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV7G03520 | 1 | |
Tree-based ortholog | 1-to-1 | FV7G03520 | 1 | ||
Anchor point | 1-to-1 | FV7G03520 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G03520 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM08G17760 GM15G41370 | 2 | |
Tree-based ortholog | 1-to-many | GM15G41370 GM08G17760 | 2 | ||
Anchor point | 1-to-many | GM15G41370 GM08G17760 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM15G41370 GM08G17760 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-1 | GR13G14250 | 1 | |
Tree-based ortholog | 1-to-1 | GR13G14250 | 1 | ||
Anchor point | 1-to-1 | GR13G14250 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR13G14250 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G155410 MD00G335020 MD05G010610 ... | 4 | |
Tree-based ortholog | 1-to-many | MD00G335020 MD00G335050 MD05G010610 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD05G010610 MD10G017310 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME02477G00230 ME03115G00210 | 2 | |
Tree-based ortholog | 1-to-many | ME02477G00230 ME03115G00210 | 2 | ||
Anchor point | 1-to-many | ME03115G00210 ME02477G00230 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME03115G00210 ME02477G00230 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT2G067080 | 1 | |
Tree-based ortholog | 1-to-1 | MT2G067080 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT2G067080 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS12G41500 | 1 | |
Tree-based ortholog | 1-to-1 | OS12G41500 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS12G41500 | 1 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL14G00040 | 1 | |
Tree-based ortholog | 1-to-1 | OL14G00040 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL14G00040 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-1 | PP00078G00040 | 1 | |
Tree-based ortholog | 1-to-1 | PP00078G00040 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00078G00040 | 1 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT05G09530 PT07G06930 | 2 | |
Tree-based ortholog | 1-to-many | PT07G06930 PT05G09530 | 2 | ||
Anchor point | 1-to-many | PT05G09530 PT07G06930 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT07G06930 | 1 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_004G12770 | 1 | |
Tree-based ortholog | 1-to-1 | PPE_004G12770 | 1 | ||
Anchor point | 1-to-1 | PPE_004G12770 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_004G12770 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC30169G00840 | 1 | |
Tree-based ortholog | 1-to-1 | RC30169G00840 | 1 | ||
Anchor point | 1-to-1 | RC30169G00840 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30169G00840 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL02G078990 SL07G066580 | 2 | |
Tree-based ortholog | 1-to-1 | SL02G078990 | 1 | ||
Anchor point | 1-to-1 | SL07G066580 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL02G078990 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST02G021960 ST07G027120 | 2 | |
Tree-based ortholog | 1-to-1 | ST02G021960 | 1 | ||
Anchor point | 1-to-1 | ST07G027120 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST02G021960 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G14610 TP5G34280 | 2 | |
Tree-based ortholog | 1-to-1 | TP1G14610 | 1 | ||
Anchor point | 1-to-many | TP5G34280 TP1G14610 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G14610 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0007G17170 | 1 | |
Tree-based ortholog | 1-to-1 | TC0007G17170 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0007G17170 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV19G10000 | 1 | |
Tree-based ortholog | 1-to-1 | VV19G10000 | 1 | ||
Anchor point | 1-to-1 | VV19G10000 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV19G10000 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G29060 ZM04G39390 | 2 | |
Tree-based ortholog | 1-to-many | ZM10G05050 ZM01G29060 ZM10G06970 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G29060 | 1 |