Integrative Orthology Viewer: AL1G15250 (Arabidopsis lyrata)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | AL1G15250 AL5G01660 | 2 | |
Tree-based ortholog | AL1G15250 | 1 | ||
Anchor point | AL5G01660 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AL1G15250 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00099G01490 | 1 | |
Anchor point | 1-to-1 | ATR_00099G01490 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00099G01490 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G14510 AT2G02470 | 2 | |
Tree-based ortholog | 1-to-1 | AT1G14510 | 1 | ||
Anchor point | 1-to-many | AT2G02470 AT1G14510 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G14510 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV6G21840 | 1 | |
Tree-based ortholog | 1-to-1 | BV6G21840 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G21840 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-1 | BR08G27460 | 1 | |
Tree-based ortholog | 1-to-many | BR09G48180 BR08G27460 BR06G10060 | 3 | ||
Anchor point | 1-to-many | BR08G27460 BR06G10060 BR09G48180 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR08G27460 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G13590 CRU_005G01380 | 2 | |
Tree-based ortholog | 1-to-1 | CRU_001G13590 | 1 | ||
Anchor point | 1-to-many | CRU_005G01380 CRU_001G13590 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G13590 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP01158G00020 | 1 | |
Tree-based ortholog | 1-to-1 | CP01158G00020 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00028G00890 | 1 | ||
Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR10G05060 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR10G05060 | 1 | ||
Citrullus lanatus | Tree-based ortholog | 1-to-many | CL10G06440 CL10G06450 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL09G00580 | 1 | ||
Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00781G00060 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00013G01010 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00028G00260 | 1 | |
Tree-based ortholog | 1-to-1 | CM00028G00260 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00028G00260 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0009G23730 | 1 | |
Tree-based ortholog | 1-to-1 | EG0009G23730 | 1 | ||
Anchor point | 1-to-1 | EG0007G00410 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0009G23730 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV5G27050 | 1 | |
Tree-based ortholog | 1-to-1 | FV5G27050 | 1 | ||
Anchor point | 1-to-1 | FV5G27050 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV5G27050 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM07G40165 GM17G00630 | 2 | |
Tree-based ortholog | 1-to-many | GM07G40165 GM17G00630 | 2 | ||
Anchor point | 1-to-1 | GM17G00630 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM07G40165 GM17G00630 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR09G16810 GR10G14340 | 2 | |
Tree-based ortholog | 1-to-many | GR05G12030 GR09G16810 GR10G14340 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR09G16810 GR10G14340 | 2 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ4G000360 | 1 | |
Tree-based ortholog | 1-to-1 | LJ4G000360 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G000360 | 1 | ||
Malus domestica | Orthologous gene family | many-to-1 | MD08G023120 | 1 | |
Tree-based ortholog | 1-to-many | MD00G288460 MD08G023120 MD15G036550 | 3 | ||
Anchor point | 1-to-1 | MD08G023120 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD08G023120 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-1 | ME07402G00010 | 1 | |
Tree-based ortholog | 1-to-1 | ME07402G00010 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME07402G00010 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT4G134510 | 1 | |
Tree-based ortholog | 1-to-1 | MT4G134510 | 1 | ||
Anchor point | 1-to-1 | MT4G134510 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G134510 | 1 | ||
Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS02G35600 OS04G36730 OS05G34640 ... | 5 | |
Anchor point | 1-to-1 | OS11G14010 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS11G14010 | 1 | ||
Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL20G00420 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL20G00420 | 1 | ||
Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00038G00610 PP00097G00810 PP00371G00280 ... | 7 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00038G00610 PP00053G01210 PP00041G00790 ... | 7 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT03G04470 PT04G23050 | 2 | |
Tree-based ortholog | 1-to-many | PT04G23050 PT03G04470 | 2 | ||
Anchor point | 1-to-1 | PT04G23050 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT03G04470 PT04G23050 | 2 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_001G52950 | 1 | |
Tree-based ortholog | 1-to-1 | PPE_001G52950 | 1 | ||
Anchor point | 1-to-1 | PPE_001G52950 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G52950 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC30063G00180 | 1 | |
Tree-based ortholog | 1-to-1 | RC30063G00180 | 1 | ||
Anchor point | 1-to-1 | RC30063G00180 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30063G00180 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL01G102750 | 1 | |
Tree-based ortholog | 1-to-many | SL01G102750 SL01G102760 | 2 | ||
Anchor point | 1-to-1 | SL01G102750 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G102750 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST01G039660 | 1 | |
Tree-based ortholog | 1-to-many | ST01G039660 ST01G039670 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G039660 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G12870 TP2G13700 | 2 | |
Tree-based ortholog | 1-to-1 | TP1G12870 | 1 | ||
Anchor point | 1-to-many | TP2G13700 TP1G12870 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G12870 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0006G06340 | 1 | |
Tree-based ortholog | 1-to-1 | TC0006G06340 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0006G06340 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV12G06270 | 1 | |
Tree-based ortholog | 1-to-1 | VV12G06270 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV12G06270 | 1 | ||
Zea mays | Tree-based ortholog | 1-to-many | ZM10G17300 ZM10G17360 ZM04G16750 ... | 11 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM07G26950 | 1 |