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Integrative Orthology Viewer:
AL1G13090
(Arabidopsis lyrata)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis lyrata | Orthologous gene family | AL1G13090 AL2G02300 | 2 |  |
| Tree-based ortholog | AL1G13090 | 1 | ||
| Anchor point | AL2G02300 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AL1G13090 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00069G00820 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00069G00820 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00069G00820 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G12640 AT1G63050 | 2 | |
| Tree-based ortholog | 1-to-1 | AT1G12640 | 1 | ||
| Anchor point | 1-to-many | AT1G63050 AT1G12640 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G12640 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV0G31320 | 1 | |
| Tree-based ortholog | 1-to-1 | BV0G31320 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G31320 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR06G08370 BR09G13170 | 2 | |
| Tree-based ortholog | 1-to-1 | BR06G08370 | 1 | ||
| Anchor point | 1-to-1 | BR09G13170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR06G08370 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_001G11720 CRU_002G01830 | 2 | |
| Tree-based ortholog | 1-to-1 | CRU_001G11720 | 1 | ||
| Anchor point | 1-to-many | CRU_002G01830 CRU_001G11720 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G11720 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-1 | CP00029G00060 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00029G00060 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR12G12020 | 1 | |
| Tree-based ortholog | 1-to-1 | CR12G12020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR12G12020 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL10G04330 | 1 | |
| Tree-based ortholog | 1-to-1 | CL10G04330 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL10G04330 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00040G00250 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00040G00250 | 1 | ||
| Anchor point | 1-to-1 | CS00040G00250 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00040G00250 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00021G03750 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00021G03750 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00021G03750 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0005G04770 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0005G04770 | 1 | ||
| Anchor point | 1-to-1 | EG0005G04770 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0005G04770 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV5G01780 | 1 | |
| Tree-based ortholog | 1-to-1 | FV5G01780 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV5G01780 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM05G03510 GM17G14070 | 2 | |
| Tree-based ortholog | 1-to-many | GM17G14070 GM05G03510 | 2 | ||
| Anchor point | 1-to-1 | GM05G03510 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM05G03510 GM17G14070 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-1 | GR10G24640 | 1 | |
| Tree-based ortholog | 1-to-many | GR10G24640 GR05G12020 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR10G24640 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-1 | LJ4G025600 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ4G025600 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G025600 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-1 | MD04G004090 | 1 | |
| Tree-based ortholog | 1-to-many | MD00G426260 MD00G231660 MD04G004090 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD04G004090 | 1 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME06748G00140 ME07035G00380 | 2 | |
| Tree-based ortholog | 1-to-many | ME06748G00140 ME07035G00380 | 2 | ||
| Anchor point | 1-to-1 | ME07035G00380 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME07035G00380 ME06748G00140 | 2 | ||
| Medicago truncatula | Orthologous gene family | many-to-1 | MT4G102750 | 1 | |
| Tree-based ortholog | 1-to-1 | MT4G102750 | 1 | ||
| Anchor point | 1-to-1 | MT4G102750 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G102750 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS02G45344 | 1 | |
| Tree-based ortholog | 1-to-1 | OS02G45344 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G45344 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL17G00890 | 1 | |
| Tree-based ortholog | 1-to-1 | OL17G00890 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL17G00890 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00002G02790 PP00061G00420 | 2 | |
| Tree-based ortholog | 1-to-many | PP00061G00420 PP00002G02790 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00279G00290 | 1 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT01G11010 PT03G12170 | 2 | |
| Tree-based ortholog | 1-to-many | PT02G14430 PT03G12170 PT01G11010 | 3 | ||
| Anchor point | 1-to-many | PT03G12170 PT01G11010 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT01G11010 PT03G12170 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_005G09990 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_005G09990 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_005G09990 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC30190G02910 | 1 | |
| Tree-based ortholog | 1-to-1 | RC30190G02910 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30190G02910 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL08G007860 SL08G080340 SL12G056420 | 3 | |
| Tree-based ortholog | 1-to-many | SL12G056420 SL08G080340 SL08G007860 | 3 | ||
| Anchor point | 1-to-1 | SL08G007860 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL08G007860 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST08G005930 ST08G026390 ST12G024680 | 3 | |
| Tree-based ortholog | 1-to-many | ST12G024680 ST08G026390 ST08G005930 | 3 | ||
| Anchor point | 1-to-1 | ST08G005930 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST08G005930 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP1G11230 TP2G01520 | 2 | |
| Tree-based ortholog | 1-to-1 | TP1G11230 | 1 | ||
| Anchor point | 1-to-many | TP1G11230 TP2G01520 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G11230 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0006G01760 | 1 | |
| Tree-based ortholog | 1-to-many | TC0007G08720 TC0006G01760 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0006G01760 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV02G07240 | 1 | |
| Tree-based ortholog | 1-to-1 | VV02G07240 | 1 | ||
| Anchor point | 1-to-1 | VV02G07240 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV02G07240 | 1 | ||
| Zea mays | Orthologous gene family | many-to-1 | ZM05G36420 | 1 | |
| Tree-based ortholog | 1-to-1 | ZM05G36420 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM05G36420 | 1 |