Integrative Orthology Viewer: AL1G07540 (Arabidopsis lyrata)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | AL1G07540 AL1G07550 AL8G26590 | 3 | |
Tree-based ortholog | AL8G26590 AL1G07540 AL1G07550 | 3 | ||
Anchor point | AL8G26590 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AL1G07540 AL8G26590 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00012G01970 ATR_00059G02530 ATR_00066G00500 | 3 | |
Tree-based ortholog | many-to-1 | ATR_00066G00500 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00066G00500 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G07920 AT1G07930 AT1G07940 ... | 4 | |
Tree-based ortholog | many-to-many | AT1G07930 AT1G07920 AT1G07940 ... | 4 | ||
Anchor point | 1-to-many | AT5G60390 AT1G07920 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | AT1G07940 AT5G60390 AT1G07920 ... | 4 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV7G00860 BV7G00880 BV7G00890 ... | 5 | |
Tree-based ortholog | many-to-many | BV7G00890 BV7G00900 BV7G00930 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | BV7G00880 BV7G00860 BV7G00890 ... | 5 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR02G11640 BR02G11660 BR03G09970 ... | 9 | |
Tree-based ortholog | many-to-many | BR06G04800 BR08G29980 BR09G51840 ... | 6 | ||
Anchor point | 1-to-many | BR08G29980 BR03G09970 BR02G11640 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | BR08G29980 BR05G12560 BR02G11660 ... | 6 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G06870 CRU_001G06880 CRU_008G20490 | 3 | |
Tree-based ortholog | many-to-many | CRU_001G06880 CRU_008G20490 CRU_001G06870 | 3 | ||
Anchor point | 1-to-many | CRU_001G06860 CRU_008G20490 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | CRU_001G06880 CRU_008G20490 | 2 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00053G00410 CP00081G00690 | 2 | |
Tree-based ortholog | many-to-1 | CP00053G00410 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00053G00410 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-many | CR06G03400 CR12G05980 | 2 | |
Tree-based ortholog | many-to-1 | CR09G09900 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | CR12G05980 CR06G03400 | 2 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL02G21100 CL06G07740 CL09G20810 ... | 5 | |
Tree-based ortholog | many-to-many | CL06G07740 CL09G20830 CL02G21100 ... | 4 | ||
Anchor point | 1-to-1 | CL02G21100 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | CL09G20810 CL09G20820 CL09G20830 | 3 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00270G00240 | 1 | |
Tree-based ortholog | many-to-1 | CS00270G00240 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00270G00240 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00043G01050 CM00082G00770 | 2 | |
Tree-based ortholog | many-to-many | CM00043G01050 CM00082G00770 | 2 | ||
Anchor point | 1-to-1 | CM00082G00770 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00043G01050 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0002G19900 EG0007G22130 EG0010G09840 ... | 4 | |
Tree-based ortholog | many-to-many | EG0010G09910 EG0007G22130 EG0002G19900 ... | 4 | ||
Anchor point | 1-to-many | EG0002G19900 EG0010G09840 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0002G19900 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV0G45010 FV0G45140 FV7G24400 | 3 | |
Tree-based ortholog | many-to-1 | FV0G45010 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV0G45140 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM05G11630 GM05G24110 GM10G35700 ... | 6 | |
Tree-based ortholog | many-to-many | GM19G07240 GM05G24110 GM16G07350 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GM16G07350 | 1 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR01G13070 GR02G12150 GR02G24960 ... | 11 | |
Tree-based ortholog | many-to-many | GR10G20440 GR01G13070 GR02G12150 ... | 4 | ||
Anchor point | 1-to-1 | GR02G24960 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GR01G13070 GR02G12150 | 2 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ1G049150 LJ2G004030 LJ5G029570 | 3 | |
Tree-based ortholog | many-to-1 | LJ1G049150 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ1G049150 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G254360 MD00G270870 MD00G274000 ... | 12 | |
Tree-based ortholog | many-to-many | MD00G468730 MD09G014850 MD11G009940 ... | 7 | ||
Anchor point | 1-to-1 | MD03G008460 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD09G014850 MD00G274000 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME02421G00600 ME02421G00610 ME02421G00630 ... | 4 | |
Tree-based ortholog | many-to-many | ME03332G01220 ME02421G00610 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ME03332G01220 ME02421G00610 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT1G013680 MT1G024175 MT1G085410 ... | 19 | |
Tree-based ortholog | many-to-many | MT1G495705 MT1G095703 MT1G095650 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MT1G095703 MT1G495705 MT1G095650 | 3 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS03G08010 OS03G08020 OS03G08050 | 3 | |
Tree-based ortholog | many-to-many | OS03G08020 OS03G08050 OS03G08010 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | OS03G08010 OS03G08050 OS03G08020 | 3 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-many | OL13G00800 OL13G02150 OL21G00830 | 3 | |
Tree-based ortholog | many-to-many | OL04G01530 OL04G05160 OL21G00830 ... | 7 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | OL21G00830 OL13G02150 OL13G00800 | 3 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00007G02150 PP00007G02430 PP00007G02460 ... | 11 | |
Tree-based ortholog | many-to-many | PP00084G00920 PP00059G00840 PP00059G00810 ... | 10 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00007G02430 PP00059G00810 PP00007G02150 ... | 7 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT06G13090 PT08G04250 PT08G04270 ... | 9 | |
Tree-based ortholog | many-to-1 | PT16G08650 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT08G04270 PT10G21860 PT08G04310 | 3 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_001G01040 PPE_002G21030 PPE_006G09400 ... | 4 | |
Tree-based ortholog | many-to-many | PPE_001G01040 PPE_006G09400 | 2 | ||
Anchor point | 1-to-1 | PPE_002G21030 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_001G01040 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29904G00340 RC29904G00350 RC29904G00360 ... | 6 | |
Tree-based ortholog | many-to-many | RC60614G00010 RC29904G00340 RC29904G00360 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | RC29904G00360 RC29938G00130 RC29904G00350 | 3 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL06G005060 SL06G009960 SL06G009970 ... | 4 | |
Tree-based ortholog | many-to-many | SL06G005060 SL06G009970 SL06G009960 | 3 | ||
Anchor point | 1-to-1 | SL06G005060 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL06G009970 SL06G005060 | 2 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST06G010680 ST06G010730 ST06G010760 ... | 6 | |
Tree-based ortholog | many-to-many | ST06G010770 ST11G025970 ST06G010730 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST11G026840 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-1 | TP2G05140 | 1 | |
Tree-based ortholog | many-to-1 | TP1G06600 | 1 | ||
Anchor point | 1-to-many | TP6G21980 TP1G06600 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP2G05140 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0005G05280 TC0009G25540 TC0009G25570 ... | 5 | |
Tree-based ortholog | many-to-many | TC0009G25570 TC0009G25540 | 2 | ||
Anchor point | 1-to-1 | TC0009G25540 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | TC0010G06590 TC0009G25540 TC0010G06560 ... | 4 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV08G02510 | 1 | |
Tree-based ortholog | many-to-1 | VV00G13090 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV03G01210 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM06G21740 ZM06G21750 ZM06G21770 ... | 8 | |
Tree-based ortholog | many-to-many | ZM09G13290 ZM06G14200 ZM07G24330 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM08G12660 ZM06G21750 ZM06G21770 ... | 6 |