Integrative Orthology Viewer: AL1G05410 (Arabidopsis lyrata)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | AL1G05410 AL2G11360 AL4G16430 ... | 5 | |
Tree-based ortholog | AL1G05410 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AL1G05410 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00066G00520 | 1 | |
Tree-based ortholog | 1-to-1 | ATR_00066G00520 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00066G00520 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G05890 AT1G65430 AT2G31510 ... | 6 | |
Tree-based ortholog | 1-to-1 | AT1G05890 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G05890 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV3G04830 BV4G14800 BV5G12350 | 3 | |
Tree-based ortholog | 1-to-1 | BV5G12350 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV4G14800 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR02G05660 BR02G17510 BR03G04520 ... | 9 | |
Tree-based ortholog | 1-to-1 | BR10G01880 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR10G01880 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G04930 CRU_002G10430 CRU_004G12690 ... | 5 | |
Tree-based ortholog | 1-to-1 | CRU_001G04930 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G04930 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00071G00100 CP00099G00460 | 2 | |
Tree-based ortholog | 1-to-many | CP00099G00460 CP00071G00100 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00071G00100 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR16G08840 | 1 | |
Tree-based ortholog | 1-to-1 | CR16G08840 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR16G08840 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL08G02920 CL11G03090 | 2 | |
Tree-based ortholog | 1-to-many | CL11G03090 CL08G02920 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL08G02920 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00393G00020 CS00501G00080 | 2 | |
Tree-based ortholog | 1-to-many | CS00393G00020 CS00501G00080 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00393G00020 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00009G01050 CM00015G01460 | 2 | |
Tree-based ortholog | 1-to-many | CM00009G01050 CM00015G01460 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00009G01050 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0001G00450 EG0001G02020 | 2 | |
Tree-based ortholog | 1-to-many | EG0008G17470 EG0001G02020 EG0001G00450 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0001G02020 EG0001G00450 | 2 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV0G49060 FV2G03610 FV2G43930 ... | 6 | |
Tree-based ortholog | 1-to-many | FV6G00210 FV0G49050 FV0G49060 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G00210 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM11G13750 GM12G03030 GM12G05740 ... | 5 | |
Tree-based ortholog | 1-to-many | GM11G13750 GM12G05740 GM13G41830 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM12G05740 GM11G13750 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR05G01970 GR06G22740 GR07G35070 ... | 5 | |
Tree-based ortholog | 1-to-many | GR13G11160 GR07G35070 GR05G01970 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR07G35070 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ3G047780 | 1 | |
Tree-based ortholog | 1-to-1 | LJ3G047780 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G047780 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G002500 MD00G028600 MD00G060480 ... | 8 | |
Tree-based ortholog | 1-to-many | MD00G060480 MD00G457630 MD00G060500 ... | 11 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD04G000050 MD00G173610 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME00097G00100 ME04197G00010 ME04197G00020 ... | 7 | |
Tree-based ortholog | 1-to-many | ME00097G00100 ME12121G00030 ME06754G00010 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME00097G00100 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT2G098580 MT3G065380 MT3G065410 ... | 5 | |
Tree-based ortholog | 1-to-many | MT5G097670 MT4G066650 MT3G065380 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G066650 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS04G41470 OS08G42740 OS09G33876 | 3 | |
Tree-based ortholog | 1-to-many | OS08G42740 OS09G33876 OS04G41470 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS04G41470 | 1 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL11G02440 | 1 | |
Tree-based ortholog | 1-to-1 | OL11G02440 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL11G02440 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00009G00980 PP00114G00010 PP00156G00090 ... | 4 | |
Tree-based ortholog | 1-to-many | PP00009G00980 PP00178G00270 PP00114G00010 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00009G00980 PP00114G00010 PP00178G00270 ... | 4 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT02G13120 PT02G13130 PT07G12690 ... | 6 | |
Tree-based ortholog | 1-to-many | PT08G07710 PT10G18060 PT17G03200 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT17G03200 PT07G12690 | 2 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_001G39270 | 1 | |
Tree-based ortholog | 1-to-many | PPE_006G36680 PPE_001G18850 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G36680 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29896G00040 RC29929G00320 RC30170G03320 | 3 | |
Tree-based ortholog | 1-to-many | RC29929G00320 RC29896G00040 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29929G00320 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL06G073340 SL11G008580 | 2 | |
Tree-based ortholog | 1-to-many | SL06G073340 SL11G008580 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL11G008580 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST06G027640 ST11G010120 | 2 | |
Tree-based ortholog | 1-to-many | ST01G019470 ST06G027640 ST11G010120 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST11G010120 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G04720 TP4G13970 TP4G14160 ... | 6 | |
Tree-based ortholog | 1-to-1 | TP1G04720 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G04720 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0004G18960 TC0005G18640 TC0008G01910 | 3 | |
Tree-based ortholog | 1-to-many | TC0005G18640 TC0004G18960 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0004G18960 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV00G07460 VV05G00450 | 2 | |
Tree-based ortholog | 1-to-many | VV05G00450 VV00G07460 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV00G07460 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM02G11500 ZM04G30870 ZM10G19390 | 3 | |
Tree-based ortholog | 1-to-many | ZM01G34360 ZM04G30870 ZM09G10830 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM10G19390 | 1 |