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Integrative Orthology Viewer:
AL1G04620
(Arabidopsis lyrata)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis lyrata | Orthologous gene family | AL1G04620 AL4G17530 | 2 |  |
| Tree-based ortholog | AL1G04620 | 1 | ||
| Anchor point | AL4G17530 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AL1G04620 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00037G00940 | 1 | |
| Tree-based ortholog | 1-to-many | ATR_00117G00560 ATR_00007G03530 ATR_00060G00950 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00037G00940 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G05140 AT2G32480 | 2 | |
| Tree-based ortholog | 1-to-1 | AT1G05140 | 1 | ||
| Anchor point | 1-to-many | AT2G32480 AT1G05140 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G05140 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV4G11510 | 1 | |
| Tree-based ortholog | 1-to-1 | BV4G11510 | 1 | ||
| Anchor point | 1-to-1 | BV4G11510 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV4G11510 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR05G11830 BR10G02600 | 2 | |
| Tree-based ortholog | 1-to-1 | BR10G02600 | 1 | ||
| Anchor point | 1-to-many | BR05G11830 BR10G02600 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR10G02600 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_001G04080 CRU_004G13390 | 2 | |
| Tree-based ortholog | 1-to-1 | CRU_001G04080 | 1 | ||
| Anchor point | 1-to-many | CRU_004G13390 CRU_001G04080 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G04080 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00087G00790 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00087G00790 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00087G00790 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR03G00240 | 1 | |
| Tree-based ortholog | 1-to-many | CR17G07480 CR03G00240 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR03G00240 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL02G08440 | 1 | |
| Tree-based ortholog | 1-to-1 | CL02G08440 | 1 | ||
| Anchor point | 1-to-1 | CL02G08440 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL02G08440 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00121G00170 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00121G00170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00121G00170 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00037G00910 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00037G00910 | 1 | ||
| Anchor point | 1-to-1 | CM00037G00910 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00037G00910 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0001G09030 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0001G09030 | 1 | ||
| Anchor point | 1-to-1 | EG0001G09030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0001G09030 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV1G16560 | 1 | |
| Tree-based ortholog | 1-to-1 | FV1G16560 | 1 | ||
| Anchor point | 1-to-1 | FV1G16560 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV1G16560 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM06G46301 GM12G10490 | 2 | |
| Tree-based ortholog | 1-to-many | GM06G46301 GM12G10490 | 2 | ||
| Anchor point | 1-to-many | GM06G46301 GM12G10490 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM06G46301 GM12G10490 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-1 | GR08G18910 | 1 | |
| Tree-based ortholog | 1-to-1 | GR08G18910 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR08G18910 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-1 | LJ3G041880 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ3G041880 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G041880 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G152990 MD00G153010 MD17G008580 | 3 | |
| Tree-based ortholog | 1-to-many | MD00G403940 MD00G153010 MD17G008580 ... | 4 | ||
| Anchor point | 1-to-1 | MD17G008580 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD17G008580 MD00G152990 MD00G153010 | 3 | ||
| Manihot esculenta | Orthologous gene family | many-to-1 | ME05214G00070 | 1 | |
| Tree-based ortholog | 1-to-1 | ME05214G00070 | 1 | ||
| Anchor point | 1-to-1 | ME05214G00070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME05214G00070 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-1 | MT4G048590 | 1 | |
| Tree-based ortholog | 1-to-1 | MT4G048590 | 1 | ||
| Anchor point | 1-to-1 | MT4G048590 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G048590 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS03G38230 | 1 | |
| Tree-based ortholog | 1-to-many | OS07G48440 OS02G32960 OS03G38230 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G38230 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL06G01580 | 1 | |
| Tree-based ortholog | 1-to-1 | OL06G01580 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL06G01580 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00003G01470 PP00170G00190 PP00213G00250 | 3 | |
| Tree-based ortholog | 1-to-many | PP00003G01470 PP00170G00190 PP00213G00250 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00003G01470 PP00170G00190 PP00213G00250 | 3 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT02G22860 PT14G15400 | 2 | |
| Tree-based ortholog | 1-to-many | PT14G15400 PT02G22860 | 2 | ||
| Anchor point | 1-to-many | PT14G15400 PT02G22860 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT14G15400 PT02G22860 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_003G19620 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_003G19620 | 1 | ||
| Anchor point | 1-to-1 | PPE_003G19620 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_003G19620 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC29823G00030 | 1 | |
| Tree-based ortholog | 1-to-1 | RC29823G00030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29823G00030 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL07G052290 | 1 | |
| Tree-based ortholog | 1-to-1 | SL07G052290 | 1 | ||
| Anchor point | 1-to-1 | SL07G052290 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL07G052290 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-1 | ST07G019430 | 1 | |
| Tree-based ortholog | 1-to-1 | ST07G019430 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST07G019430 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP1G03990 TP4G14840 | 2 | |
| Tree-based ortholog | 1-to-1 | TP1G03990 | 1 | ||
| Anchor point | 1-to-many | TP4G14840 TP1G03990 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G03990 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0002G36270 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0002G36270 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G36270 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV12G10840 | 1 | |
| Tree-based ortholog | 1-to-1 | VV12G10840 | 1 | ||
| Anchor point | 1-to-1 | VV12G10840 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV12G10840 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM01G45310 ZM05G08420 | 2 | |
| Tree-based ortholog | 1-to-many | ZM07G24520 ZM07G09860 ZM05G08420 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM01G45310 ZM05G08420 | 2 |