Functional clusters
Information
- Type
- Mapman term
- Identifier
- 34.99
- Description
- transport.misc
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Arabidopsis lyrata | scaffold_1 | 17 | CH_aly_109 | 3 | 3 | 0.000909483 |
Arabidopsis lyrata | scaffold_3 | 17 | CH_aly_35 | 5 | 9 | 0.00000100992 |
Arabidopsis lyrata | scaffold_7 | 17 | CH_aly_110 | 3 | 3 | 0.000909483 |
Arabidopsis thaliana | 1 | 17 | CH_ath_277 | 4 | 5 | 0.0000358214 |
Arabidopsis thaliana | 1 | 17 | CH_ath_312 | 4 | 6 | 0.000107139 |
Arabidopsis thaliana | 2 | 17 | CH_ath_94 | 7 | 9 | 0.0000000000132355 |
Capsella rubella | scaffold_1 | 17 | CH_cru_201 | 4 | 4 | 0.0000137865 |
Capsella rubella | scaffold_2 | 17 | CH_cru_74 | 6 | 6 | 0.000000000301369 |
Capsella rubella | scaffold_3 | 17 | CH_cru_202 | 4 | 4 | 0.0000137865 |
Capsella rubella | scaffold_2 | 18 | CH_cru_56 | 10 | 145 | 0.0000617656 |
Citrus sinensis | scaffold00013 | 17 | CH_csi_36 | 6 | 6 | 0.000000000786505 |
Citrus sinensis | scaffold00034 | 17 | CH_csi_131 | 4 | 4 | 0.0000228358 |
Citrus sinensis | scaffold00047 | 17 | CH_csi_132 | 4 | 4 | 0.0000228358 |
Citrus sinensis | scaffold00059 | 17 | CH_csi_130 | 4 | 4 | 0.0000228358 |
Eucalyptus grandis | scaffold_1 | 17 | CH_egr_450 | 5 | 5 | 0.000000104837 |
Eucalyptus grandis | scaffold_2 | 17 | CH_egr_774 | 4 | 6 | 0.000316765 |
Eucalyptus grandis | scaffold_2 | 17 | CH_egr_214 | 8 | 10 | 0.000000000000539117 |
Eucalyptus grandis | scaffold_2 | 17 | CH_egr_508 | 5 | 6 | 0.000000626438 |
Eucalyptus grandis | scaffold_3 | 17 | CH_egr_567 | 6 | 16 | 0.00000394091 |
Eucalyptus grandis | scaffold_3 | 17 | CH_egr_233 | 9 | 19 | 0.00000000000513971 |
Eucalyptus grandis | scaffold_6 | 17 | CH_egr_389 | 6 | 8 | 0.0000000142512 |
Eucalyptus grandis | scaffold_6 | 17 | CH_egr_721 | 4 | 5 | 0.000106009 |
Eucalyptus grandis | scaffold_3 | 18 | CH_egr_208 | 11 | 115 | 0.000000596057 |
Eucalyptus grandis | scaffold_6 | 18 | CH_egr_245 | 12 | 208 | 0.0000262018 |
Glycine max | Gm03 | 17 | CH_gma_231 | 5 | 6 | 0.00000152521 |
Glycine max | Gm09 | 17 | CH_gma_332 | 4 | 4 | 0.0000473179 |
Glycine max | Gm10 | 17 | CH_gma_230 | 5 | 6 | 0.00000152521 |
Malus domestica | 1 | 17 | CH_mdo_156 | 4 | 5 | 0.0000183341 |
Manihot esculenta | scaffold03264 | 17 | CH_mes_140 | 4 | 4 | 0.0000253427 |
Manihot esculenta | scaffold03614 | 17 | CH_mes_73 | 5 | 5 | 0.000000146476 |
Oryza sativa ssp. japonica | 10 | 17 | CH_osa_227 | 6 | 13 | 0.00000452174 |
Oryza sativa ssp. japonica | 11 | 17 | CH_osa_392 | 8 | 66 | 0.000411915 |
Oryza sativa ssp. japonica | 12 | 17 | CH_osa_183 | 10 | 68 | 0.00000073222 |
Oryza sativa ssp. japonica | 9 | 17 | CH_osa_175 | 5 | 5 | 0.000000455033 |
Oryza sativa ssp. japonica | 12 | 18 | CH_osa_66 | 10 | 68 | 0.00000073222 |
Populus trichocarpa | Chr11 | 17 | CH_ptr_394 | 4 | 4 | 0.000224992 |
Populus trichocarpa | Chr11 | 17 | CH_ptr_136 | 7 | 8 | 0.00000000112548 |
Prunus persica | scaffold_1 | 17 | CH_ppe_340 | 4 | 5 | 0.0000740743 |
Prunus persica | scaffold_1 | 17 | CH_ppe_208 | 5 | 6 | 0.000000419688 |
Prunus persica | scaffold_1 | 17 | CH_ppe_378 | 4 | 6 | 0.000221375 |
Prunus persica | scaffold_2 | 17 | CH_ppe_183 | 5 | 5 | 0.0000000702248 |
Prunus persica | scaffold_4 | 17 | CH_ppe_146 | 7 | 14 | 0.00000000510427 |
Prunus persica | scaffold_4 | 17 | CH_ppe_291 | 4 | 4 | 0.0000148716 |
Ricinus communis | 29818 | 17 | CH_rco_96 | 5 | 6 | 0.000000183303 |
Solanum lycopersicum | ch01 | 17 | CH_sly_385 | 4 | 4 | 0.000239618 |
Solanum lycopersicum | ch03 | 17 | CH_sly_90 | 7 | 7 | 0.000000000175508 |
Solanum lycopersicum | ch05 | 17 | CH_sly_91 | 7 | 7 | 0.000000000175508 |
Vitis vinifera | chr10 | 17 | CH_vvi_276 | 4 | 4 | 0.0000180015 |
Vitis vinifera | chr11 | 17 | CH_vvi_262 | 5 | 9 | 0.0000111983 |
Vitis vinifera | chr12 | 17 | CH_vvi_170 | 5 | 5 | 0.0000000903807 |
Vitis vinifera | chr16 | 17 | CH_vvi_322 | 4 | 5 | 0.0000896426 |
Vitis vinifera | chr4 | 17 | CH_vvi_198 | 5 | 6 | 0.000000540012 |
Vitis vinifera | chr8 | 17 | CH_vvi_60 | 11 | 24 | 0.00000000000000290506 |
Vitis vinifera | chr8 | 18 | CH_vvi_43 | 11 | 24 | 0.00000000000000290506 |
Zea mays | 7 | 17 | CH_zma_65 | 5 | 5 | 0.0000000381365 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |