Functional clusters
Information
- Type
- Mapman term
- Identifier
- 34.10
- Description
- transport.nucleotides
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Arabidopsis thaliana | 1 | 17 | CH_ath_244 | 3 | 3 | 0.0000107558 |
Arabidopsis thaliana | 4 | 17 | CH_ath_97 | 5 | 6 | 0.0000000000239973 |
Brassica rapa | A01 | 17 | CH_bra_132 | 3 | 3 | 0.00000571555 |
Capsella rubella | scaffold_7 | 17 | CH_cru_31 | 6 | 6 | 0.00000000000000225966 |
Citrus sinensis | scaffold00007 | 17 | CH_csi_78 | 3 | 3 | 0.000000715865 |
Eucalyptus grandis | scaffold_4 | 17 | CH_egr_64 | 8 | 8 | 5.67124e-23 |
Eucalyptus grandis | scaffold_6 | 17 | CH_egr_344 | 4 | 4 | 0.00000000234334 |
Glycine max | Gm09 | 17 | CH_gma_252 | 3 | 3 | 0.00000365397 |
Gossypium raimondii | Chr07 | 17 | CH_gra_245 | 4 | 22 | 0.0000356394 |
Gossypium raimondii | Chr09 | 17 | CH_gra_215 | 3 | 3 | 0.00000872602 |
Malus domestica | 10 | 17 | CH_mdo_106 | 3 | 4 | 0.00000107371 |
Oryza sativa ssp. japonica | 4 | 17 | CH_osa_215 | 3 | 3 | 0.00000256287 |
Prunus persica | scaffold_4 | 17 | CH_ppe_243 | 3 | 3 | 0.00000222927 |
Solanum lycopersicum | ch02 | 17 | CH_sly_56 | 6 | 7 | 0.000000000000161904 |
Solanum lycopersicum | ch10 | 17 | CH_sly_309 | 3 | 3 | 0.0000325641 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |