Functional clusters
Information
- Type
- Mapman term
- Identifier
- 30.2.20
- Description
- signalling.receptor kinases.wheat LRK10 like
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Arabidopsis lyrata | scaffold_8 | 17 | CH_aly_102 | 2 | 2 | 0.000631373 |
Arabidopsis lyrata | scaffold_8 | 19 | CH_aly_2 | 2 | 2 | 0.000631373 |
Arabidopsis thaliana | 1 | 17 | CH_ath_102 | 5 | 13 | 0.0000000000958066 |
Arabidopsis thaliana | 5 | 17 | CH_ath_134 | 4 | 7 | 0.0000000109532 |
Eucalyptus grandis | scaffold_2 | 17 | CH_egr_52 | 12 | 40 | 9.85527e-26 |
Eucalyptus grandis | scaffold_2 | 18 | CH_egr_50 | 12 | 40 | 9.85527e-26 |
Eucalyptus grandis | scaffold_6 | 19 | CH_egr_1 | 5 | 9 | 0.0000000000014062 |
Malus domestica | 6 | 17 | CH_mdo_94 | 3 | 3 | 0.000000527337 |
Manihot esculenta | scaffold06871 | 17 | CH_mes_117 | 3 | 5 | 0.00000478855 |
Manihot esculenta | scaffold04043 | 19 | CH_mes_7 | 2 | 2 | 0.000955201 |
Manihot esculenta | scaffold06871 | 19 | CH_mes_8 | 2 | 2 | 0.000955201 |
Populus trichocarpa | Chr17 | 17 | CH_ptr_86 | 6 | 14 | 0.000000000000570571 |
Populus trichocarpa | scaffold_67 | 17 | CH_ptr_142 | 5 | 16 | 0.00000000236935 |
Populus trichocarpa | Chr17 | 19 | CH_ptr_1 | 6 | 14 | 0.000000000000390457 |
Populus trichocarpa | scaffold_67 | 19 | CH_ptr_3 | 5 | 16 | 0.00000000174624 |
Prunus persica | scaffold_3 | 19 | CH_ppe_2 | 2 | 2 | 0.000216255 |
Ricinus communis | 29747 | 17 | CH_rco_103 | 3 | 3 | 0.0000002893 |
Ricinus communis | 29747 | 19 | CH_rco_7 | 2 | 2 | 0.000981981 |
Zea mays | 3 | 17 | CH_zma_13 | 5 | 6 | 0.00000000000000604579 |
Zea mays | 3 | 19 | CH_zma_2 | 3 | 5 | 0.000000151746 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |