Functional clusters
Information
- Type
- Mapman term
- Identifier
- 30.2.11
- Description
- signalling.receptor kinases.leucine rich repeat XI
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Arabidopsis lyrata | scaffold_5 | 17 | CH_aly_111 | 3 | 3 | 0.000937905 |
Brassica rapa | A01 | 17 | CH_bra_93 | 5 | 5 | 0.000000569679 |
Brassica rapa | A02 | 17 | CH_bra_196 | 4 | 4 | 0.0000848294 |
Brassica rapa | A04 | 17 | CH_bra_55 | 12 | 79 | 0.0000000107935 |
Brassica rapa | A10 | 17 | CH_bra_65 | 6 | 7 | 0.0000000265284 |
Brassica rapa | A04 | 18 | CH_bra_13 | 14 | 97 | 0.000000000225974 |
Capsella rubella | scaffold_1 | 17 | CH_cru_233 | 5 | 9 | 0.0000735207 |
Capsella rubella | scaffold_1 | 17 | CH_cru_172 | 5 | 6 | 0.00000356631 |
Capsella rubella | scaffold_3 | 17 | CH_cru_53 | 7 | 7 | 0.0000000000319517 |
Capsella rubella | scaffold_4 | 17 | CH_cru_54 | 8 | 11 | 0.0000000000375 |
Capsella rubella | scaffold_5 | 17 | CH_cru_279 | 4 | 5 | 0.000403545 |
Capsella rubella | scaffold_7 | 17 | CH_cru_163 | 6 | 11 | 0.00000196198 |
Capsella rubella | scaffold_1 | 18 | CH_cru_50 | 14 | 208 | 0.0000175049 |
Citrus sinensis | scaffold00033 | 17 | CH_csi_116 | 5 | 5 | 0.00000850837 |
Citrus sinensis | scaffold00046 | 17 | CH_csi_109 | 7 | 14 | 0.00000495207 |
Citrus sinensis | scaffold00077 | 17 | CH_csi_146 | 5 | 6 | 0.0000504684 |
Citrus sinensis | scaffold00305 | 17 | CH_csi_145 | 6 | 11 | 0.0000504377 |
Citrus sinensis | scaffold00033 | 18 | CH_csi_12 | 15 | 86 | 0.0000000138263 |
Eucalyptus grandis | scaffold_1 | 17 | CH_egr_53 | 20 | 23 | 1.68735e-25 |
Eucalyptus grandis | scaffold_1 | 17 | CH_egr_638 | 7 | 10 | 0.0000167898 |
Eucalyptus grandis | scaffold_1 | 17 | CH_egr_170 | 15 | 24 | 0.0000000000000154364 |
Eucalyptus grandis | scaffold_11 | 17 | CH_egr_74 | 18 | 21 | 2.31676e-22 |
Eucalyptus grandis | scaffold_11 | 17 | CH_egr_539 | 11 | 30 | 0.00000168777 |
Eucalyptus grandis | scaffold_15 | 17 | CH_egr_342 | 13 | 30 | 0.0000000021423 |
Eucalyptus grandis | scaffold_2 | 17 | CH_egr_765 | 5 | 5 | 0.000263915 |
Eucalyptus grandis | scaffold_2 | 17 | CH_egr_571 | 8 | 13 | 0.00000408915 |
Eucalyptus grandis | scaffold_3 | 17 | CH_egr_293 | 19 | 75 | 0.00000000035547 |
Eucalyptus grandis | scaffold_3 | 17 | CH_egr_173 | 14 | 20 | 0.0000000000000208118 |
Eucalyptus grandis | scaffold_3 | 17 | CH_egr_580 | 10 | 25 | 0.00000467504 |
Eucalyptus grandis | scaffold_3 | 17 | CH_egr_406 | 8 | 9 | 0.0000000311386 |
Eucalyptus grandis | scaffold_3 | 17 | CH_egr_506 | 10 | 21 | 0.000000550215 |
Eucalyptus grandis | scaffold_4 | 17 | CH_egr_440 | 11 | 24 | 0.0000000879297 |
Eucalyptus grandis | scaffold_5 | 17 | CH_egr_689 | 9 | 23 | 0.0000506189 |
Eucalyptus grandis | scaffold_6 | 17 | CH_egr_41 | 25 | 36 | 3.27264e-28 |
Eucalyptus grandis | scaffold_6 | 17 | CH_egr_809 | 6 | 9 | 0.00049552 |
Eucalyptus grandis | scaffold_6 | 17 | CH_egr_810 | 6 | 9 | 0.00049552 |
Eucalyptus grandis | scaffold_6 | 17 | CH_egr_230 | 21 | 77 | 0.00000000000269398 |
Eucalyptus grandis | scaffold_6 | 17 | CH_egr_309 | 13 | 28 | 0.000000000700053 |
Eucalyptus grandis | scaffold_6 | 17 | CH_egr_492 | 9 | 15 | 0.00000036825 |
Eucalyptus grandis | scaffold_7 | 17 | CH_egr_499 | 11 | 27 | 0.000000430117 |
Eucalyptus grandis | scaffold_7 | 17 | CH_egr_117 | 19 | 33 | 2.60648e-18 |
Eucalyptus grandis | scaffold_7 | 17 | CH_egr_674 | 8 | 16 | 0.0000383625 |
Eucalyptus grandis | scaffold_7 | 17 | CH_egr_595 | 6 | 6 | 0.00000627485 |
Eucalyptus grandis | scaffold_8 | 17 | CH_egr_302 | 16 | 49 | 0.00000000054294 |
Eucalyptus grandis | scaffold_1 | 18 | CH_egr_51 | 20 | 23 | 1.68735e-25 |
Eucalyptus grandis | scaffold_1 | 18 | CH_egr_122 | 15 | 24 | 0.0000000000000154364 |
Eucalyptus grandis | scaffold_11 | 18 | CH_egr_220 | 11 | 30 | 0.00000168777 |
Eucalyptus grandis | scaffold_11 | 18 | CH_egr_67 | 18 | 21 | 2.31676e-22 |
Eucalyptus grandis | scaffold_15 | 18 | CH_egr_181 | 13 | 30 | 0.0000000021423 |
Eucalyptus grandis | scaffold_3 | 18 | CH_egr_124 | 14 | 20 | 0.0000000000000208118 |
Eucalyptus grandis | scaffold_3 | 18 | CH_egr_204 | 23 | 162 | 0.000000278252 |
Eucalyptus grandis | scaffold_3 | 18 | CH_egr_166 | 19 | 75 | 0.00000000035547 |
Eucalyptus grandis | scaffold_4 | 18 | CH_egr_200 | 11 | 24 | 0.0000000879297 |
Eucalyptus grandis | scaffold_6 | 18 | CH_egr_22 | 46 | 149 | 1.77251e-33 |
Eucalyptus grandis | scaffold_7 | 18 | CH_egr_206 | 11 | 27 | 0.000000430117 |
Eucalyptus grandis | scaffold_7 | 18 | CH_egr_275 | 13 | 76 | 0.000990569 |
Eucalyptus grandis | scaffold_7 | 18 | CH_egr_98 | 19 | 33 | 2.60648e-18 |
Eucalyptus grandis | scaffold_8 | 18 | CH_egr_169 | 16 | 49 | 0.00000000054294 |
Glycine max | Gm10 | 17 | CH_gma_308 | 6 | 11 | 0.0000255637 |
Glycine max | Gm14 | 17 | CH_gma_133 | 13 | 70 | 0.0000000161317 |
Glycine max | Gm16 | 17 | CH_gma_4 | 30 | 38 | 1.77834e-48 |
Glycine max | Gm16 | 17 | CH_gma_138 | 7 | 9 | 0.0000000205431 |
Glycine max | Gm16 | 17 | CH_gma_6 | 30 | 57 | 2.04203e-40 |
Glycine max | Gm16 | 17 | CH_gma_88 | 9 | 14 | 0.000000000111667 |
Glycine max | Gm18 | 17 | CH_gma_214 | 12 | 76 | 0.000000996538 |
Glycine max | Gm18 | 17 | CH_gma_160 | 11 | 47 | 0.0000000728495 |
Glycine max | Gm14 | 18 | CH_gma_48 | 13 | 70 | 0.0000000161317 |
Glycine max | Gm16 | 18 | CH_gma_1 | 111 | 255 | 2.40373e-148 |
Glycine max | Gm16 | 18 | CH_gma_69 | 10 | 61 | 0.0000330467 |
Glycine max | Gm16 | 18 | CH_gma_44 | 10 | 25 | 0.000000001663 |
Glycine max | Gm18 | 18 | CH_gma_56 | 15 | 132 | 0.000000410134 |
Glycine max | Gm18 | 18 | CH_gma_51 | 11 | 47 | 0.0000000728495 |
Gossypium raimondii | Chr02 | 17 | CH_gra_140 | 6 | 6 | 0.000000188102 |
Gossypium raimondii | Chr05 | 17 | CH_gra_40 | 19 | 60 | 6.05196e-17 |
Gossypium raimondii | Chr06 | 17 | CH_gra_50 | 16 | 39 | 6.76581e-16 |
Gossypium raimondii | Chr07 | 17 | CH_gra_12 | 25 | 50 | 1.81083e-29 |
Gossypium raimondii | Chr09 | 17 | CH_gra_10 | 30 | 73 | 9.61566e-33 |
Gossypium raimondii | Chr09 | 17 | CH_gra_63 | 11 | 15 | 0.0000000000000891468 |
Gossypium raimondii | Chr10 | 17 | CH_gra_228 | 7 | 15 | 0.0000143621 |
Gossypium raimondii | Chr11 | 17 | CH_gra_45 | 12 | 15 | 3.86947e-16 |
Gossypium raimondii | Chr11 | 17 | CH_gra_31 | 15 | 22 | 2.90896e-19 |
Gossypium raimondii | Chr05 | 18 | CH_gra_34 | 19 | 60 | 6.05196e-17 |
Gossypium raimondii | Chr06 | 18 | CH_gra_39 | 16 | 39 | 6.76581e-16 |
Gossypium raimondii | Chr09 | 18 | CH_gra_13 | 30 | 73 | 9.61566e-33 |
Gossypium raimondii | Chr09 | 18 | CH_gra_43 | 11 | 15 | 0.0000000000000891468 |
Gossypium raimondii | Chr11 | 18 | CH_gra_36 | 12 | 15 | 3.86947e-16 |
Gossypium raimondii | Chr11 | 18 | CH_gra_29 | 15 | 22 | 2.90896e-19 |
Malus domestica | 10 | 17 | CH_mdo_128 | 6 | 10 | 0.00000472866 |
Malus domestica | 11 | 17 | CH_mdo_83 | 7 | 12 | 0.00000015797 |
Malus domestica | 14 | 17 | CH_mdo_154 | 5 | 6 | 0.000015442 |
Malus domestica | 4 | 17 | CH_mdo_143 | 8 | 31 | 0.0000121446 |
Malus domestica | 4 | 17 | CH_mdo_12 | 14 | 44 | 0.0000000000000786753 |
Malus domestica | 4 | 18 | CH_mdo_27 | 10 | 76 | 0.00008153 |
Malus domestica | 4 | 18 | CH_mdo_7 | 14 | 44 | 0.0000000000000786753 |
Manihot esculenta | scaffold08686 | 17 | CH_mes_36 | 10 | 30 | 0.000000000782973 |
Manihot esculenta | scaffold08686 | 18 | CH_mes_10 | 10 | 30 | 0.000000000782973 |
Oryza sativa ssp. japonica | 10 | 17 | CH_osa_170 | 6 | 13 | 0.000000310468 |
Oryza sativa ssp. japonica | 11 | 17 | CH_osa_147 | 7 | 21 | 0.000000078064 |
Oryza sativa ssp. japonica | 2 | 17 | CH_osa_8 | 19 | 38 | 1.45127e-31 |
Oryza sativa ssp. japonica | 2 | 17 | CH_osa_294 | 5 | 12 | 0.0000375567 |
Oryza sativa ssp. japonica | 6 | 17 | CH_osa_269 | 5 | 11 | 0.0000219783 |
Oryza sativa ssp. japonica | 8 | 17 | CH_osa_348 | 4 | 6 | 0.000188501 |
Oryza sativa ssp. japonica | 2 | 18 | CH_osa_55 | 12 | 155 | 0.0000000823875 |
Oryza sativa ssp. japonica | 2 | 18 | CH_osa_8 | 19 | 38 | 1.45127e-31 |
Physcomitrella patens | scaffold_107 | 17 | CH_ppa_21 | 6 | 25 | 0.000027667 |
Populus trichocarpa | Chr01 | 17 | CH_ptr_227 | 10 | 38 | 0.000000564251 |
Populus trichocarpa | Chr02 | 17 | CH_ptr_342 | 5 | 6 | 0.0000487913 |
Populus trichocarpa | Chr02 | 17 | CH_ptr_343 | 5 | 6 | 0.0000487913 |
Populus trichocarpa | Chr05 | 17 | CH_ptr_202 | 13 | 72 | 0.0000000882556 |
Populus trichocarpa | Chr11 | 17 | CH_ptr_214 | 9 | 25 | 0.000000243176 |
Populus trichocarpa | Chr12 | 17 | CH_ptr_100 | 12 | 29 | 0.00000000000890502 |
Populus trichocarpa | Chr12 | 17 | CH_ptr_62 | 15 | 40 | 0.00000000000000907219 |
Populus trichocarpa | Chr13 | 17 | CH_ptr_316 | 6 | 10 | 0.0000190133 |
Populus trichocarpa | Chr15 | 17 | CH_ptr_272 | 7 | 14 | 0.00000344866 |
Populus trichocarpa | Chr15 | 17 | CH_ptr_308 | 7 | 16 | 0.0000112666 |
Populus trichocarpa | Chr19 | 17 | CH_ptr_375 | 6 | 13 | 0.00015083 |
Populus trichocarpa | scaffold_39 | 17 | CH_ptr_165 | 9 | 19 | 0.000000011697 |
Populus trichocarpa | Chr01 | 18 | CH_ptr_84 | 10 | 38 | 0.000000564251 |
Populus trichocarpa | Chr05 | 18 | CH_ptr_64 | 18 | 102 | 0.00000000000765532 |
Populus trichocarpa | Chr11 | 18 | CH_ptr_104 | 10 | 58 | 0.0000506159 |
Populus trichocarpa | Chr12 | 18 | CH_ptr_31 | 31 | 235 | 8.0552e-19 |
Prunus persica | scaffold_1 | 17 | CH_ppe_223 | 6 | 7 | 0.000000850302 |
Prunus persica | scaffold_1 | 17 | CH_ppe_437 | 4 | 4 | 0.000756349 |
Prunus persica | scaffold_2 | 17 | CH_ppe_248 | 6 | 8 | 0.0000033641 |
Prunus persica | scaffold_2 | 17 | CH_ppe_101 | 12 | 31 | 0.0000000000556202 |
Prunus persica | scaffold_2 | 17 | CH_ppe_327 | 6 | 11 | 0.0000537113 |
Prunus persica | scaffold_4 | 17 | CH_ppe_302 | 6 | 10 | 0.0000246834 |
Prunus persica | scaffold_4 | 17 | CH_ppe_232 | 7 | 12 | 0.00000116722 |
Prunus persica | scaffold_4 | 17 | CH_ppe_56 | 12 | 17 | 0.00000000000000286952 |
Prunus persica | scaffold_4 | 17 | CH_ppe_14 | 18 | 22 | 1.23888e-26 |
Prunus persica | scaffold_6 | 17 | CH_ppe_225 | 6 | 7 | 0.000000850302 |
Prunus persica | scaffold_6 | 17 | CH_ppe_224 | 6 | 7 | 0.000000850302 |
Prunus persica | scaffold_7 | 17 | CH_ppe_328 | 5 | 6 | 0.0000572919 |
Prunus persica | scaffold_7 | 17 | CH_ppe_276 | 7 | 15 | 0.00000917141 |
Prunus persica | scaffold_8 | 17 | CH_ppe_127 | 8 | 10 | 0.000000000867515 |
Prunus persica | scaffold_8 | 17 | CH_ppe_279 | 5 | 5 | 0.00000965135 |
Prunus persica | scaffold_1 | 18 | CH_ppe_100 | 10 | 51 | 0.0000249722 |
Prunus persica | scaffold_2 | 18 | CH_ppe_56 | 12 | 31 | 0.0000000000556202 |
Prunus persica | scaffold_4 | 18 | CH_ppe_42 | 12 | 17 | 0.00000000000000286952 |
Prunus persica | scaffold_6 | 18 | CH_ppe_113 | 10 | 65 | 0.000297949 |
Prunus persica | scaffold_8 | 18 | CH_ppe_92 | 10 | 46 | 0.00000843726 |
Ricinus communis | 27985 | 17 | CH_rco_172 | 6 | 16 | 0.0000522973 |
Ricinus communis | 29643 | 17 | CH_rco_233 | 4 | 5 | 0.000508578 |
Ricinus communis | 29685 | 17 | CH_rco_234 | 4 | 5 | 0.000508578 |
Solanum lycopersicum | ch06 | 17 | CH_sly_162 | 6 | 7 | 0.0000000685024 |
Solanum lycopersicum | ch07 | 17 | CH_sly_263 | 5 | 6 | 0.00000730878 |
Solanum lycopersicum | ch08 | 17 | CH_sly_363 | 4 | 4 | 0.000152088 |
Solanum lycopersicum | ch08 | 17 | CH_sly_492 | 5 | 12 | 0.000926504 |
Solanum lycopersicum | ch12 | 17 | CH_sly_350 | 6 | 17 | 0.000113025 |
Solanum lycopersicum | ch12 | 17 | CH_sly_69 | 11 | 28 | 0.0000000000059365 |
Solanum lycopersicum | ch04 | 18 | CH_sly_80 | 11 | 93 | 0.0000105171 |
Solanum lycopersicum | ch12 | 18 | CH_sly_49 | 11 | 28 | 0.0000000000059365 |
Vitis vinifera | chr11 | 17 | CH_vvi_215 | 7 | 14 | 0.00000155911 |
Vitis vinifera | chr12 | 17 | CH_vvi_128 | 10 | 26 | 0.00000000272333 |
Vitis vinifera | chr14 | 17 | CH_vvi_358 | 5 | 8 | 0.000225905 |
Vitis vinifera | chr16 | 17 | CH_vvi_304 | 8 | 33 | 0.0000570714 |
Vitis vinifera | chr17 | 17 | CH_vvi_284 | 5 | 6 | 0.0000246492 |
Vitis vinifera | chr18 | 17 | CH_vvi_386 | 4 | 4 | 0.00038111 |
Vitis vinifera | chr18 | 17 | CH_vvi_213 | 6 | 8 | 0.00000123512 |
Vitis vinifera | chr4 | 17 | CH_vvi_126 | 8 | 12 | 0.00000000248961 |
Vitis vinifera | chr6 | 17 | CH_vvi_212 | 6 | 8 | 0.00000123512 |
Vitis vinifera | chr7 | 17 | CH_vvi_385 | 4 | 4 | 0.00038111 |
Vitis vinifera | chr8 | 17 | CH_vvi_238 | 6 | 9 | 0.00000367091 |
Vitis vinifera | chr9 | 17 | CH_vvi_138 | 9 | 20 | 0.00000000846441 |
Vitis vinifera | chr12 | 18 | CH_vvi_60 | 10 | 26 | 0.00000000272333 |
Vitis vinifera | chr9 | 18 | CH_vvi_83 | 21 | 300 | 0.000000626893 |
Zea mays | 10 | 17 | CH_zma_80 | 5 | 5 | 0.000000141263 |
Zea mays | 4 | 17 | CH_zma_23 | 8 | 11 | 0.00000000000292646 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |