Functional clusters   top

Information

Type
Mapman term
Identifier
29.5.11.4.3.2
Description
protein.degradation.ubiquitin.E3.SCF.FBOX

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyratascaffold_117CH_aly_939400.000498934
Arabidopsis lyratascaffold_817CH_aly_8911670.000426996
Arabidopsis lyratascaffold_118CH_aly_1211680.000501809
Arabidopsis lyratascaffold_318CH_aly_13212850.000525765
Arabidopsis lyratascaffold_818CH_aly_1111670.000426996
Arabidopsis thaliana117CH_ath_3719300.000438202
Arabidopsis thaliana117CH_ath_2999250.0000692056
Arabidopsis thaliana217CH_ath_1939170.000000967744
Arabidopsis thaliana317CH_ath_15913400.0000000776117
Arabidopsis thaliana317CH_ath_3721487.7836e-18
Arabidopsis thaliana417CH_ath_226660.00000423971
Arabidopsis thaliana417CH_ath_313680.000114212
Arabidopsis thaliana517CH_ath_2987120.0000678392
Arabidopsis thaliana517CH_ath_1109100.00000000045856
Arabidopsis thaliana118CH_ath_8112540.0000736472
Arabidopsis thaliana118CH_ath_86151030.00035872
Arabidopsis thaliana218CH_ath_7311380.0000159387
Arabidopsis thaliana318CH_ath_3121487.7836e-18
Arabidopsis thaliana318CH_ath_98201990.00094616
Arabidopsis thaliana318CH_ath_5813400.0000000776117
Arabidopsis thaliana418CH_ath_7110280.00000945015
Arabidopsis thaliana518CH_ath_6014520.000000200064
Arabidopsis thaliana518CH_ath_95171420.000783042
Brassica rapaA0117CH_bra_136660.00000671418
Brassica rapaA0117CH_bra_135660.00000671418
Brassica rapaA0217CH_bra_1918170.0000738122
Brassica rapaA0317CH_bra_5912270.0000000135605
Brassica rapaA0417CH_bra_81770.000000156986
Brassica rapaA0417CH_bra_2113230.0000000000230851
Brassica rapaA0517CH_bra_2599290.000560892
Brassica rapaA0318CH_bra_1912270.0000000135605
Brassica rapaA0418CH_bra_2614560.0000013495
Brassica rapaA0418CH_bra_1113230.0000000000230851
Brassica rapaA0518CH_bra_34211790.0000726171
Capsella rubellascaffold_117CH_cru_16115450.00000179159
Capsella rubellascaffold_217CH_cru_28012390.0004114
Capsella rubellascaffold_217CH_cru_295670.000586998
Capsella rubellascaffold_317CH_cru_27011310.000300311
Capsella rubellascaffold_317CH_cru_23917760.0000994632
Capsella rubellascaffold_417CH_cru_4015190.0000000000000518573
Capsella rubellascaffold_417CH_cru_24612360.000146605
Capsella rubellascaffold_417CH_cru_13312220.000000125154
Capsella rubellascaffold_517CH_cru_135880.00000012825
Capsella rubellascaffold_517CH_cru_3920390.0000000000000423681
Capsella rubellascaffold_517CH_cru_134880.00000012825
Capsella rubellascaffold_617CH_cru_3207110.000960187
Capsella rubellascaffold_617CH_cru_93990.00000000492496
Capsella rubellascaffold_717CH_cru_24915600.000160342
Capsella rubellascaffold_817CH_cru_2316188.39668e-17
Capsella rubellascaffold_817CH_cru_920201.23796e-24
Capsella rubellascaffold_817CH_cru_136880.00000012825
Capsella rubellascaffold_118CH_cru_25442800.0000000000608326
Capsella rubellascaffold_218CH_cru_6412390.0004114
Capsella rubellascaffold_318CH_cru_6211310.000300311
Capsella rubellascaffold_318CH_cru_53292040.0000398513
Capsella rubellascaffold_418CH_cru_3612220.000000125154
Capsella rubellascaffold_418CH_cru_2015190.0000000000000518573
Capsella rubellascaffold_418CH_cru_5912360.000146605
Capsella rubellascaffold_518CH_cru_1920390.0000000000000423681
Capsella rubellascaffold_618CH_cru_48231240.0000100243
Capsella rubellascaffold_718CH_cru_6115600.000160342
Capsella rubellascaffold_818CH_cru_920201.23796e-24
Capsella rubellascaffold_818CH_cru_1516188.39668e-17
Citrus sinensisscaffold0001717CH_csi_469210.00000000988792
Citrus sinensisscaffold0007717CH_csi_185440.000256663
Citrus sinensisscaffold0001718CH_csi_2111980.000203936
Eucalyptus grandisscaffold_117CH_egr_385660.000000011972
Eucalyptus grandisscaffold_1017CH_egr_12012166.54091e-18
Eucalyptus grandisscaffold_1017CH_egr_736440.000172099
Eucalyptus grandisscaffold_517CH_egr_3816161.57786e-29
Eucalyptus grandisscaffold_517CH_egr_2598100.0000000000364148
Eucalyptus grandisscaffold_517CH_egr_606560.00000856729
Eucalyptus grandisscaffold_817CH_egr_6926150.0000561787
Eucalyptus grandisscaffold_817CH_egr_43810430.0000000831803
Eucalyptus grandisscaffold_917CH_egr_313780.000000000788873
Eucalyptus grandisscaffold_1018CH_egr_9912166.54091e-18
Eucalyptus grandisscaffold_518CH_egr_4016161.57786e-29
Eucalyptus grandisscaffold_818CH_egr_198182320.0000000597398
Glycine maxGm0317CH_gma_403440.000223123
Glycine maxGm1817CH_gma_402440.000223123
Glycine maxGm1817CH_gma_3815418.53234e-17
Glycine maxGm1917CH_gma_788100.0000000000394763
Glycine maxGm1818CH_gma_2221892.73348e-20
Gossypium raimondiiChr0217CH_gra_2996170.000310944
Gossypium raimondiiChr0417CH_gra_3611111.97021e-18
Gossypium raimondiiChr0517CH_gra_76880.00000000000242569
Gossypium raimondiiChr0717CH_gra_166680.000000756817
Gossypium raimondiiChr0917CH_gra_194550.00000291125
Gossypium raimondiiChr1017CH_gra_120660.000000027472
Gossypium raimondiiChr1017CH_gra_938100.000000000107342
Gossypium raimondiiChr1117CH_gra_319590.00035538
Gossypium raimondiiChr1317CH_gra_1507130.00000042213
Gossypium raimondiiChr0418CH_gra_3211111.97021e-18
Gossypium raimondiiChr1018CH_gra_6610650.0000237398
Malus domestica1117CH_mdo_539340.0000000095064
Malus domestica1118CH_mdo_26101180.0000633856
Manihot esculentascaffold0415117CH_mes_33770.000000000106122
Manihot esculentascaffold0659817CH_mes_92550.00000132279
Manihot esculentascaffold0691417CH_mes_167440.000146522
Oryza sativa ssp. japonica1017CH_osa_2206210.00000322032
Oryza sativa ssp. japonica417CH_osa_3045150.0000569848
Oryza sativa ssp. japonica817CH_osa_5011480.000000000000377804
Oryza sativa ssp. japonica817CH_osa_897140.000000000656425
Oryza sativa ssp. japonica818CH_osa_64101210.000000546998
Oryza sativa ssp. japonica818CH_osa_3611480.000000000000377804
Populus trichocarpaChr0417CH_ptr_3612166.16036e-18
Populus trichocarpaChr0517CH_ptr_490450.000925
Populus trichocarpaChr0617CH_ptr_2827190.0000047009
Populus trichocarpaChr0418CH_ptr_3212166.16036e-18
Prunus persicascaffold_117CH_ppe_247550.00000328653
Prunus persicascaffold_117CH_ppe_391440.000319912
Prunus persicascaffold_1517CH_ppe_4367310.000727962
Prunus persicascaffold_417CH_ppe_11910230.000000000362156
Prunus persicascaffold_717CH_ppe_2067120.000000259934
Prunus persicascaffold_418CH_ppe_6110230.000000000362156
Ricinus communis2984217CH_rco_266460.000744495
Solanum lycopersicumch0517CH_sly_460450.000693441
Solanum lycopersicumch0817CH_sly_101780.000000000538932
Solanum lycopersicumch0817CH_sly_260560.00000656458
Solanum lycopersicumch0818CH_sly_9010970.000217045
Zea mays217CH_zma_1338410.00000628734
Zea mays717CH_zma_28770.0000000000130193
Zea mays218CH_zma_3310870.00000743277

Functional clusters experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1GOPrimary GO data only.230800.001X
2GOPrimary and orthology projected GO data.230800.001X
3GOAll GO data.230800.001X
4GOPrimary GO data only.101503000.001X
5GOPrimary and orthology projected GO data.101503000.001X
6GOAll GO data.101503000.001X
7GOPrimary GO data only.230800.001V
8GOPrimary and orthology projected GO data.230800.001V
9GOAll GO data.230800.001V
10GOPrimary GO data only.101503000.001V
11GOPrimary and orthology projected GO data.101503000.001V
12GOAll GO data.101503000.001V
13InterProNo filter applied.230800.001X
14InterProNo filter applied.101503000.001X
15InterProNo filter applied.230800.001V
16InterProNo filter applied.101503000.001V
17MapManNo filter applied.230800.001X
18MapManNo filter applied.101503000.001X
19MapManNo filter applied.230800.001V
20MapManNo filter applied.101503000.001V