Functional clusters
Information
- Type
- Mapman term
- Identifier
- 26.3
- Description
- misc.gluco-, galacto- and mannosidases
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Arabidopsis lyrata | scaffold_4 | 17 | CH_aly_91 | 4 | 11 | 0.000473953 |
Arabidopsis lyrata | scaffold_5 | 17 | CH_aly_96 | 3 | 3 | 0.000569766 |
Arabidopsis lyrata | scaffold_5 | 17 | CH_aly_97 | 3 | 3 | 0.000569766 |
Arabidopsis thaliana | 2 | 17 | CH_ath_81 | 8 | 14 | 0.00000000000135527 |
Brassica rapa | A04 | 17 | CH_bra_195 | 4 | 5 | 0.0000813558 |
Brassica rapa | A05 | 17 | CH_bra_5 | 11 | 14 | 1.73893e-19 |
Brassica rapa | A09 | 17 | CH_bra_157 | 4 | 4 | 0.0000163294 |
Brassica rapa | A05 | 18 | CH_bra_5 | 11 | 14 | 1.73893e-19 |
Capsella rubella | scaffold_4 | 17 | CH_cru_307 | 4 | 9 | 0.000676048 |
Capsella rubella | scaffold_5 | 17 | CH_cru_184 | 4 | 4 | 0.00000544665 |
Capsella rubella | scaffold_6 | 17 | CH_cru_183 | 4 | 4 | 0.00000544665 |
Eucalyptus grandis | scaffold_10 | 17 | CH_egr_587 | 4 | 4 | 0.00000567169 |
Eucalyptus grandis | scaffold_10 | 17 | CH_egr_265 | 6 | 6 | 0.0000000000696088 |
Eucalyptus grandis | scaffold_2 | 17 | CH_egr_341 | 6 | 8 | 0.00000000193739 |
Glycine max | Gm08 | 17 | CH_gma_178 | 5 | 6 | 0.000000256051 |
Glycine max | Gm11 | 17 | CH_gma_19 | 11 | 12 | 1.31312e-21 |
Glycine max | Gm12 | 17 | CH_gma_30 | 9 | 9 | 8.18321e-18 |
Glycine max | Gm11 | 18 | CH_gma_19 | 11 | 12 | 1.31312e-21 |
Glycine max | Gm12 | 18 | CH_gma_63 | 11 | 155 | 0.00000146406 |
Gossypium raimondii | Chr02 | 17 | CH_gra_111 | 7 | 22 | 0.00000000654603 |
Malus domestica | 11 | 17 | CH_mdo_305 | 3 | 3 | 0.000789103 |
Malus domestica | 15 | 17 | CH_mdo_235 | 4 | 9 | 0.000254366 |
Manihot esculenta | scaffold06407 | 17 | CH_mes_253 | 6 | 42 | 0.000861441 |
Manihot esculenta | scaffold06914 | 17 | CH_mes_4 | 12 | 12 | 1.15059e-24 |
Manihot esculenta | scaffold11106 | 17 | CH_mes_18 | 8 | 9 | 0.0000000000000322761 |
Manihot esculenta | scaffold06914 | 18 | CH_mes_3 | 12 | 12 | 1.15059e-24 |
Oryza sativa ssp. japonica | 4 | 17 | CH_osa_77 | 9 | 65 | 0.000000000216077 |
Oryza sativa ssp. japonica | 4 | 17 | CH_osa_107 | 5 | 6 | 0.00000000558354 |
Oryza sativa ssp. japonica | 5 | 17 | CH_osa_102 | 6 | 13 | 0.00000000269504 |
Oryza sativa ssp. japonica | 4 | 18 | CH_osa_60 | 10 | 203 | 0.000000235176 |
Populus trichocarpa | Chr01 | 17 | CH_ptr_15 | 19 | 48 | 4.1456e-31 |
Populus trichocarpa | Chr04 | 17 | CH_ptr_197 | 5 | 6 | 0.0000000741167 |
Populus trichocarpa | Chr01 | 18 | CH_ptr_13 | 19 | 48 | 4.1456e-31 |
Prunus persica | scaffold_2 | 17 | CH_ppe_117 | 6 | 6 | 0.000000000237604 |
Prunus persica | scaffold_6 | 17 | CH_ppe_67 | 11 | 34 | 0.0000000000000941202 |
Prunus persica | scaffold_6 | 17 | CH_ppe_147 | 6 | 8 | 0.00000000660237 |
Prunus persica | scaffold_6 | 17 | CH_ppe_10 | 16 | 19 | 4.2256e-31 |
Prunus persica | scaffold_7 | 17 | CH_ppe_360 | 4 | 6 | 0.00017854 |
Prunus persica | scaffold_6 | 18 | CH_ppe_46 | 11 | 34 | 0.0000000000000941202 |
Prunus persica | scaffold_6 | 18 | CH_ppe_10 | 16 | 19 | 4.2256e-31 |
Ricinus communis | 29986 | 17 | CH_rco_40 | 6 | 6 | 0.0000000000380777 |
Ricinus communis | 30226 | 17 | CH_rco_145 | 5 | 11 | 0.00000510281 |
Solanum lycopersicum | ch01 | 17 | CH_sly_397 | 3 | 3 | 0.00028437 |
Solanum lycopersicum | ch01 | 17 | CH_sly_203 | 4 | 4 | 0.000000556865 |
Solanum lycopersicum | ch02 | 17 | CH_sly_396 | 3 | 3 | 0.00028437 |
Vitis vinifera | chr13 | 17 | CH_vvi_6 | 18 | 21 | 1.75043e-36 |
Vitis vinifera | chr7 | 17 | CH_vvi_184 | 5 | 6 | 0.000000201426 |
Vitis vinifera | chr13 | 18 | CH_vvi_6 | 18 | 21 | 1.75043e-36 |
Zea mays | 1 | 17 | CH_zma_74 | 6 | 16 | 0.0000000764564 |
Zea mays | 1 | 17 | CH_zma_270 | 3 | 3 | 0.000651426 |
Zea mays | 10 | 17 | CH_zma_271 | 3 | 3 | 0.000651426 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |