Functional clusters
Information
- Type
- Mapman term
- Identifier
- 23.3.3
- Description
- nucleotide metabolism.salvage.NUDIX hydrolases
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Arabidopsis thaliana | 2 | 17 | CH_ath_248 | 3 | 3 | 0.0000138168 |
Capsella rubella | scaffold_3 | 17 | CH_cru_212 | 3 | 3 | 0.0000200984 |
Citrus sinensis | scaffold00007 | 17 | CH_csi_122 | 3 | 3 | 0.0000114538 |
Eucalyptus grandis | scaffold_8 | 17 | CH_egr_21 | 13 | 16 | 2.07245e-33 |
Eucalyptus grandis | scaffold_8 | 18 | CH_egr_23 | 13 | 16 | 2.07245e-33 |
Glycine max | Gm02 | 17 | CH_gma_134 | 5 | 10 | 0.0000000163174 |
Malus domestica | 10 | 17 | CH_mdo_50 | 4 | 4 | 0.00000000604128 |
Populus trichocarpa | Chr04 | 17 | CH_ptr_333 | 3 | 3 | 0.0000342464 |
Prunus persica | scaffold_1 | 17 | CH_ppe_106 | 5 | 6 | 0.000000000119354 |
Prunus persica | scaffold_4 | 17 | CH_ppe_306 | 3 | 3 | 0.0000255353 |
Solanum lycopersicum | ch10 | 17 | CH_sly_270 | 3 | 3 | 0.0000114435 |
Vitis vinifera | chr12 | 17 | CH_vvi_267 | 3 | 3 | 0.00001537 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |