Functional clusters
Information
- Type
- Mapman term
- Identifier
- 20
- Description
- stress
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Arabidopsis thaliana | 4 | 17 | CH_ath_98 | 20 | 53 | 0.0000000000334369 |
Arabidopsis thaliana | 3 | 18 | CH_ath_70 | 31 | 226 | 0.00000919592 |
Arabidopsis thaliana | 4 | 18 | CH_ath_45 | 20 | 53 | 0.0000000000334369 |
Capsella rubella | scaffold_1 | 17 | CH_cru_170 | 16 | 54 | 0.00000320345 |
Capsella rubella | scaffold_7 | 17 | CH_cru_137 | 16 | 45 | 0.0000001364 |
Capsella rubella | scaffold_1 | 18 | CH_cru_45 | 16 | 54 | 0.00000320345 |
Capsella rubella | scaffold_7 | 18 | CH_cru_38 | 16 | 45 | 0.0000001364 |
Capsella rubella | scaffold_7 | 18 | CH_cru_54 | 18 | 82 | 0.0000495318 |
Eucalyptus grandis | scaffold_4 | 17 | CH_egr_357 | 12 | 15 | 0.00000000396426 |
Eucalyptus grandis | scaffold_4 | 17 | CH_egr_213 | 23 | 48 | 0.000000000000490299 |
Eucalyptus grandis | scaffold_4 | 18 | CH_egr_145 | 23 | 48 | 0.000000000000490299 |
Eucalyptus grandis | scaffold_4 | 18 | CH_egr_184 | 12 | 15 | 0.00000000396426 |
Gossypium raimondii | Chr02 | 17 | CH_gra_165 | 9 | 13 | 0.000000748286 |
Malus domestica | 11 | 17 | CH_mdo_255 | 7 | 12 | 0.000288406 |
Malus domestica | 2 | 17 | CH_mdo_120 | 7 | 8 | 0.00000320008 |
Malus domestica | 2 | 17 | CH_mdo_228 | 8 | 17 | 0.000213064 |
Oryza sativa ssp. japonica | 1 | 17 | CH_osa_37 | 18 | 38 | 0.00000000000000692754 |
Oryza sativa ssp. japonica | 1 | 18 | CH_osa_28 | 18 | 38 | 0.00000000000000692754 |
Populus trichocarpa | Chr17 | 18 | CH_ptr_81 | 10 | 13 | 0.0000000847211 |
Prunus persica | scaffold_2 | 17 | CH_ppe_347 | 6 | 6 | 0.000101205 |
Prunus persica | scaffold_3 | 17 | CH_ppe_440 | 8 | 15 | 0.000777416 |
Prunus persica | scaffold_5 | 17 | CH_ppe_211 | 11 | 19 | 0.000000518886 |
Prunus persica | scaffold_5 | 18 | CH_ppe_83 | 11 | 19 | 0.000000518886 |
Solanum lycopersicum | ch01 | 17 | CH_sly_201 | 9 | 13 | 0.000000546859 |
Solanum lycopersicum | ch01 | 18 | CH_sly_95 | 13 | 58 | 0.0006489 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |