Functional clusters   top

Information

Type
Mapman term
Identifier
17.8.1
Description
hormone metabolism.salicylic acid.synthesis-degradation

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis thaliana517CH_ath_338370.000179951
Brassica rapaA1017CH_bra_66440.0000000303702
Capsella rubellascaffold_217CH_cru_267360.000232056
Capsella rubellascaffold_717CH_cru_195330.0000116221
Citrus sinensisscaffold0005817CH_csi_121330.0000114538
Eucalyptus grandisscaffold_1117CH_egr_150785.74854e-16
Eucalyptus grandisscaffold_217CH_egr_762340.000219655
Eucalyptus grandisscaffold_217CH_egr_761340.000219655
Eucalyptus grandisscaffold_717CH_egr_296560.000000000398103
Eucalyptus grandisscaffold_817CH_egr_2913171.04988e-31
Eucalyptus grandisscaffold_818CH_egr_3213171.04988e-31
Glycine maxGm0917CH_gma_132450.000000015662
Glycine maxGm1617CH_gma_77570.000000000029266
Glycine maxGm1817CH_gma_113440.00000000313358
Gossypium raimondiiChr0817CH_gra_253350.0000572954
Gossypium raimondiiChr1117CH_gra_666120.000000000000498622
Malus domestica617CH_mdo_5797.20536e-17
Manihot esculentascaffold0752017CH_mes_128330.00000930702
Manihot esculentascaffold0884717CH_mes_144340.0000372076
Manihot esculentascaffold1017317CH_mes_127330.00000930702
Oryza sativa ssp. japonica1117CH_osa_329355.50682e-16
Oryza sativa ssp. japonica417CH_osa_1425150.0000000704056
Oryza sativa ssp. japonica617CH_osa_1416380.0000000502816
Oryza sativa ssp. japonica617CH_osa_279251.60397e-17
Oryza sativa ssp. japonica617CH_osa_2604120.0000144109
Oryza sativa ssp. japonica618CH_osa_35111750.00000000000033171
Populus trichocarpaChr1717CH_ptr_2016150.0000000869348
Populus trichocarpaChr1917CH_ptr_208570.000000137358
Prunus persicascaffold_517CH_ppe_161440.0000000142166
Prunus persicascaffold_817CH_ppe_557110.00000000000000174943
Solanum lycopersicumch0917CH_sly_454330.000604438
Vitis viniferachr117CH_vvi_73660.0000000000000930199
Vitis viniferachr1817CH_vvi_359340.000226992
Vitis viniferachr417CH_vvi_1912154.37656e-29
Vitis viniferachr417CH_vvi_303330.0000568021
Vitis viniferachr418CH_vvi_2012154.37656e-29
Zea mays417CH_zma_49450.00000000347191
Zea mays517CH_zma_19560.00000000000125729
Zea mays917CH_zma_110330.00000212463

Functional clusters experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1GOPrimary GO data only.230800.001X
2GOPrimary and orthology projected GO data.230800.001X
3GOAll GO data.230800.001X
4GOPrimary GO data only.101503000.001X
5GOPrimary and orthology projected GO data.101503000.001X
6GOAll GO data.101503000.001X
7GOPrimary GO data only.230800.001V
8GOPrimary and orthology projected GO data.230800.001V
9GOAll GO data.230800.001V
10GOPrimary GO data only.101503000.001V
11GOPrimary and orthology projected GO data.101503000.001V
12GOAll GO data.101503000.001V
13InterProNo filter applied.230800.001X
14InterProNo filter applied.101503000.001X
15InterProNo filter applied.230800.001V
16InterProNo filter applied.101503000.001V
17MapManNo filter applied.230800.001X
18MapManNo filter applied.101503000.001X
19MapManNo filter applied.230800.001V
20MapManNo filter applied.101503000.001V