Functional clusters   top

Information

Type
Mapman term
Identifier
17.5.1
Description
hormone metabolism.ethylene.synthesis-degradation

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica rapaA0317CH_bra_71550.000000038879
Brassica rapaA0417CH_bra_70550.000000038879
Capsella rubellascaffold_317CH_cru_182440.00000544665
Capsella rubellascaffold_817CH_cru_61660.0000000000738845
Citrus sinensisscaffold0004317CH_csi_40670.00000000184622
Citrus sinensisscaffold0005817CH_csi_147450.0000554769
Eucalyptus grandisscaffold_1117CH_egr_232770.00000000000373574
Eucalyptus grandisscaffold_1117CH_egr_1619110.00000000000000532877
Eucalyptus grandisscaffold_217CH_egr_802460.000397693
Eucalyptus grandisscaffold_317CH_egr_654440.0000267372
Eucalyptus grandisscaffold_517CH_egr_3716197.14414e-30
Eucalyptus grandisscaffold_917CH_egr_17410180.0000000000000209156
Eucalyptus grandisscaffold_518CH_egr_3916197.14414e-30
Glycine maxGm0217CH_gma_165550.0000000865654
Glycine maxGm0217CH_gma_411460.000297143
Glycine maxGm0817CH_gma_140690.0000000310719
Glycine maxGm0817CH_gma_302440.0000199485
Glycine maxGm0917CH_gma_50880.00000000000000689449
Glycine maxGm1417CH_gma_356450.0000993945
Glycine maxGm1517CH_gma_258580.00000479522
Glycine maxGm1817CH_gma_301450.0000199485
Glycine maxGm0918CH_gma_5210750.0000000805179
Gossypium raimondiiChr0217CH_gra_161560.000000583001
Gossypium raimondiiChr0617CH_gra_4210136.26157e-17
Gossypium raimondiiChr1017CH_gra_90790.0000000000779812
Gossypium raimondiiChr1317CH_gra_1858450.00000189234
Gossypium raimondiiChr0618CH_gra_3510136.26157e-17
Malus domestica217CH_mdo_63560.0000000261306
Malus domestica517CH_mdo_230490.000220438
Manihot esculentascaffold0867317CH_mes_133440.0000134949
Manihot esculentascaffold0912017CH_mes_19890.000000000000066827
Oryza sativa ssp. japonica617CH_osa_906140.000000000734213
Oryza sativa ssp. japonica817CH_osa_1975170.00000121845
Physcomitrella patensscaffold_29917CH_ppa_48340.000489013
Populus trichocarpaChr0117CH_ptr_134670.000000000790247
Populus trichocarpaChr1117CH_ptr_2985100.00000759638
Prunus persicascaffold_417CH_ppe_227570.000000912509
Prunus persicascaffold_417CH_ppe_281440.0000102029
Prunus persicascaffold_817CH_ppe_265590.00000543592
Prunus persicascaffold_817CH_ppe_1716100.0000000385264
Ricinus communis2969317CH_rco_766100.0000000101103
Ricinus communis2980617CH_rco_139440.00000384486
Solanum lycopersicumch0217CH_sly_2711151.06061e-18
Solanum lycopersicumch0317CH_sly_287440.0000179138
Solanum lycopersicumch0917CH_sly_516172.29734e-32
Solanum lycopersicumch0917CH_sly_342450.0000892301
Solanum lycopersicumch1017CH_sly_392460.000266678
Solanum lycopersicumch1117CH_sly_288440.0000179138
Solanum lycopersicumch0218CH_sly_2311151.06061e-18
Solanum lycopersicumch0918CH_sly_516172.29734e-32
Vitis viniferachr1017CH_vvi_1018241.71669e-32
Vitis viniferachr1117CH_vvi_282440.0000214353
Vitis viniferachr217CH_vvi_669120.0000000000000172291
Vitis viniferachr317CH_vvi_4012201.2208e-18
Vitis viniferachr517CH_vvi_1316188.71135e-31
Vitis viniferachr1018CH_vvi_1018241.71669e-32
Vitis viniferachr218CH_vvi_103101440.000166182
Vitis viniferachr318CH_vvi_3412201.2208e-18
Vitis viniferachr518CH_vvi_1416188.71135e-31
Zea mays1017CH_zma_716180.000000057579

Functional clusters experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1GOPrimary GO data only.230800.001X
2GOPrimary and orthology projected GO data.230800.001X
3GOAll GO data.230800.001X
4GOPrimary GO data only.101503000.001X
5GOPrimary and orthology projected GO data.101503000.001X
6GOAll GO data.101503000.001X
7GOPrimary GO data only.230800.001V
8GOPrimary and orthology projected GO data.230800.001V
9GOAll GO data.230800.001V
10GOPrimary GO data only.101503000.001V
11GOPrimary and orthology projected GO data.101503000.001V
12GOAll GO data.101503000.001V
13InterProNo filter applied.230800.001X
14InterProNo filter applied.101503000.001X
15InterProNo filter applied.230800.001V
16InterProNo filter applied.101503000.001V
17MapManNo filter applied.230800.001X
18MapManNo filter applied.101503000.001X
19MapManNo filter applied.230800.001V
20MapManNo filter applied.101503000.001V