Functional clusters   top

Information

Type
Mapman term
Identifier
16.2.1.3
Description
secondary metabolism.phenylpropanoids.lignin biosynthesis.4CL

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica rapaA0517CH_bra_163340.0000197375
Brassica rapaA0817CH_bra_40440.00000000220989
Capsella rubellascaffold_117CH_cru_80440.000000000953815
Eucalyptus grandisscaffold_1017CH_egr_758360.000208401
Eucalyptus grandisscaffold_1117CH_egr_612330.0000104354
Eucalyptus grandisscaffold_217CH_egr_678340.0000417211
Glycine maxGm1717CH_gma_294330.0000160313
Populus trichocarpaChr1217CH_ptr_306330.0000109608

Functional clusters experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1GOPrimary GO data only.230800.001X
2GOPrimary and orthology projected GO data.230800.001X
3GOAll GO data.230800.001X
4GOPrimary GO data only.101503000.001X
5GOPrimary and orthology projected GO data.101503000.001X
6GOAll GO data.101503000.001X
7GOPrimary GO data only.230800.001V
8GOPrimary and orthology projected GO data.230800.001V
9GOAll GO data.230800.001V
10GOPrimary GO data only.101503000.001V
11GOPrimary and orthology projected GO data.101503000.001V
12GOAll GO data.101503000.001V
13InterProNo filter applied.230800.001X
14InterProNo filter applied.101503000.001X
15InterProNo filter applied.230800.001V
16InterProNo filter applied.101503000.001V
17MapManNo filter applied.230800.001X
18MapManNo filter applied.101503000.001X
19MapManNo filter applied.230800.001V
20MapManNo filter applied.101503000.001V