Functional clusters   top

Information

Type
Mapman term
Identifier
11.8
Description
lipid metabolism.exotics(steroids, squalene etc)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica rapaA0217CH_bra_78560.000000106496
Brassica rapaA0917CH_bra_128100.0000000000000281841
Capsella rubellascaffold_517CH_cru_164440.00000210984
Citrus sinensisscaffold0003017CH_csi_1825280.000200336
Eucalyptus grandisscaffold_1017CH_egr_9510112.46626e-20
Eucalyptus grandisscaffold_317CH_egr_347690.00000000248619
Eucalyptus grandisscaffold_317CH_egr_4916170.000000358772
Eucalyptus grandisscaffold_1018CH_egr_8210112.46626e-20
Eucalyptus grandisscaffold_318CH_egr_228101650.00000465549
Gossypium raimondiiChr0317CH_gra_119550.0000000249139
Gossypium raimondiiChr0717CH_gra_77780.00000000000254494
Gossypium raimondiiChr0917CH_gra_2065100.00000618408
Gossypium raimondiiChr0917CH_gra_160570.000000520037
Gossypium raimondiiChr0718CH_gra_4610380.00000000000597913
Malus domestica1617CH_mdo_174480.0000341647
Oryza sativa ssp. japonica1117CH_osa_391330.000404537
Oryza sativa ssp. japonica1217CH_osa_255460.0000114922
Populus trichocarpaChr0117CH_ptr_484330.000854081
Populus trichocarpaChr0317CH_ptr_255440.00000232661
Populus trichocarpaChr1117CH_ptr_678110.0000000000000191324
Populus trichocarpaChr1118CH_ptr_7210740.000000000483186
Prunus persicascaffold_517CH_ppe_307470.0000299817
Ricinus communis2973817CH_rco_170460.0000287126
Ricinus communis3013817CH_rco_746110.00000000774497
Solanum lycopersicumch0417CH_sly_241440.00000382437
Solanum lycopersicumch0517CH_sly_94670.000000000265496
Solanum lycopersicumch1017CH_sly_242440.00000382437
Solanum lycopersicumch0518CH_sly_81101730.0000109033
Vitis viniferachr1717CH_vvi_207440.00000107528

Functional clusters experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1GOPrimary GO data only.230800.001X
2GOPrimary and orthology projected GO data.230800.001X
3GOAll GO data.230800.001X
4GOPrimary GO data only.101503000.001X
5GOPrimary and orthology projected GO data.101503000.001X
6GOAll GO data.101503000.001X
7GOPrimary GO data only.230800.001V
8GOPrimary and orthology projected GO data.230800.001V
9GOAll GO data.230800.001V
10GOPrimary GO data only.101503000.001V
11GOPrimary and orthology projected GO data.101503000.001V
12GOAll GO data.101503000.001V
13InterProNo filter applied.230800.001X
14InterProNo filter applied.101503000.001X
15InterProNo filter applied.230800.001V
16InterProNo filter applied.101503000.001V
17MapManNo filter applied.230800.001X
18MapManNo filter applied.101503000.001X
19MapManNo filter applied.230800.001V
20MapManNo filter applied.101503000.001V