Functional clusters   top

Information

Type
Mapman term
Identifier
10.8.1
Description
cell wall.pectin*esterases.PME

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyratascaffold_617CH_aly_66330.0000686466
Arabidopsis thaliana517CH_ath_325330.000172758
Brassica rapaA0117CH_bra_279330.000779148
Brassica rapaA0517CH_bra_280330.000779148
Brassica rapaA0917CH_bra_278330.000779148
Capsella rubellascaffold_317CH_cru_301330.000614311
Capsella rubellascaffold_617CH_cru_303330.000614311
Capsella rubellascaffold_617CH_cru_302330.000614311
Citrus sinensisscaffold0000117CH_csi_49570.0000000127264
Citrus sinensisscaffold0001317CH_csi_90450.000001575
Eucalyptus grandisscaffold_1717CH_egr_404440.0000000280379
Eucalyptus grandisscaffold_517CH_egr_176660.0000000000000209647
Eucalyptus grandisscaffold_617CH_egr_662330.0000308525
Eucalyptus grandisscaffold_817CH_egr_663330.0000308525
Glycine maxGm0317CH_gma_162570.0000000817042
Glycine maxGm0317CH_gma_477330.000721106
Glycine maxGm0417CH_gma_476330.000721106
Glycine maxGm0917CH_gma_2375110.00000178362
Glycine maxGm1317CH_gma_473330.000721106
Glycine maxGm1517CH_gma_173580.000000217456
Glycine maxGm1717CH_gma_474330.000721106
Glycine maxGm1917CH_gma_475330.000721106
Glycine maxGm1917CH_gma_234440.00000168492
Gossypium raimondiiChr0617CH_gra_167440.000000769123
Gossypium raimondiiChr0817CH_gra_55770.00000000000000650376
Gossypium raimondiiChr0917CH_gra_321330.000367838
Malus domestica117CH_mdo_935130.000000331049
Malus domestica217CH_mdo_2595450.000302832
Manihot esculentascaffold0691417CH_mes_46550.00000000558153
Manihot esculentascaffold0694817CH_mes_240330.000626308
Manihot esculentascaffold0757117CH_mes_241330.000626308
Manihot esculentascaffold1011417CH_mes_239330.000626308
Manihot esculentascaffold1030517CH_mes_97440.00000188467
Populus trichocarpaChr0117CH_ptr_237440.000000957191
Populus trichocarpaChr0317CH_ptr_3884100.000198916
Populus trichocarpaChr0517CH_ptr_432330.000440231
Populus trichocarpaChr0617CH_ptr_191570.0000000430492
Prunus persicascaffold_217CH_ppe_229440.00000109196
Prunus persicascaffold_617CH_ppe_230440.00000109196
Prunus persicascaffold_717CH_ppe_2146230.000000611717
Prunus persicascaffold_817CH_ppe_412330.000445504
Ricinus communis2973917CH_rco_249290.000000000000434886
Ricinus communis3007617CH_rco_138450.00000383841
Ricinus communis3012817CH_rco_115440.00000076917
Ricinus communis3014717CH_rco_114440.00000076917
Solanum lycopersicumch0117CH_sly_441330.000527369
Solanum lycopersicumch0117CH_sly_160570.0000000637798
Solanum lycopersicumch0717CH_sly_440330.000527369
Solanum lycopersicumch1017CH_sly_192590.000000381152
Solanum lycopersicumch1117CH_sly_259450.00000636616
Vitis viniferachr1617CH_vvi_191440.000000304078
Vitis viniferachr617CH_vvi_214450.0000015182

Functional clusters experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1GOPrimary GO data only.230800.001X
2GOPrimary and orthology projected GO data.230800.001X
3GOAll GO data.230800.001X
4GOPrimary GO data only.101503000.001X
5GOPrimary and orthology projected GO data.101503000.001X
6GOAll GO data.101503000.001X
7GOPrimary GO data only.230800.001V
8GOPrimary and orthology projected GO data.230800.001V
9GOAll GO data.230800.001V
10GOPrimary GO data only.101503000.001V
11GOPrimary and orthology projected GO data.101503000.001V
12GOAll GO data.101503000.001V
13InterProNo filter applied.230800.001X
14InterProNo filter applied.101503000.001X
15InterProNo filter applied.230800.001V
16InterProNo filter applied.101503000.001V
17MapManNo filter applied.230800.001X
18MapManNo filter applied.101503000.001X
19MapManNo filter applied.230800.001V
20MapManNo filter applied.101503000.001V