Functional clusters
Information
- Type
- Mapman term
- Identifier
- 1
- Description
- PS
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Arabidopsis lyrata | scaffold_2 | 17 | CH_aly_1 | 18 | 80 | 7.17045e-21 |
Arabidopsis lyrata | scaffold_2 | 18 | CH_aly_1 | 21 | 95 | 9.14535e-25 |
Arabidopsis lyrata | scaffold_2 | 19 | CH_aly_1 | 12 | 80 | 0.0000000000551804 |
Arabidopsis lyrata | scaffold_2 | 20 | CH_aly_1 | 15 | 95 | 0.00000000000000639509 |
Glycine max | Gm03 | 18 | CH_gma_66 | 10 | 74 | 0.0000210081 |
Manihot esculenta | scaffold04355 | 17 | CH_mes_21 | 11 | 22 | 0.0000000000000814343 |
Manihot esculenta | scaffold04355 | 18 | CH_mes_9 | 11 | 22 | 0.0000000000000814343 |
Manihot esculenta | scaffold04355 | 19 | CH_mes_1 | 9 | 22 | 0.000000000449342 |
Oryza sativa ssp. japonica | 1 | 17 | CH_osa_76 | 8 | 17 | 0.000000000172311 |
Oryza sativa ssp. japonica | 12 | 17 | CH_osa_347 | 5 | 14 | 0.000176408 |
Oryza sativa ssp. japonica | 1 | 18 | CH_osa_84 | 10 | 117 | 0.0000078919 |
Oryza sativa ssp. japonica | 1 | 19 | CH_osa_4 | 7 | 17 | 0.0000000176064 |
Oryza sativa ssp. japonica | 4 | 20 | CH_osa_5 | 10 | 46 | 0.000000000203245 |
Ricinus communis | 29923 | 17 | CH_rco_184 | 5 | 9 | 0.0000680979 |
Solanum lycopersicum | ch01 | 17 | CH_sly_190 | 9 | 26 | 0.000000354998 |
Solanum lycopersicum | ch07 | 17 | CH_sly_261 | 6 | 9 | 0.00000717729 |
Solanum lycopersicum | ch10 | 17 | CH_sly_227 | 6 | 8 | 0.00000241647 |
Solanum lycopersicum | ch12 | 17 | CH_sly_151 | 7 | 9 | 0.0000000359574 |
Solanum lycopersicum | ch01 | 18 | CH_sly_69 | 10 | 38 | 0.00000054922 |
Solanum lycopersicum | ch07 | 18 | CH_sly_94 | 16 | 228 | 0.000524538 |
Solanum lycopersicum | ch01 | 19 | CH_sly_1 | 9 | 26 | 0.0000000371702 |
Solanum lycopersicum | ch10 | 19 | CH_sly_6 | 4 | 4 | 0.000236604 |
Solanum lycopersicum | ch01 | 20 | CH_sly_9 | 10 | 38 | 0.0000000455965 |
Vitis vinifera | chrUn | 18 | CH_vvi_92 | 14 | 224 | 0.0000180777 |
Zea mays | chloroplast | 17 | CH_zma_157 | 8 | 37 | 0.0000253186 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |