Functional clusters
Information
- Type
- InterPro domain
- Identifier
- IPR018181
- Description
- Heat shock protein 70, conserved site
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Beta vulgaris | Bvchr1.sca002 | 13 | CH_bvu_49 | 6 | 10 | 0.00000000000073515 |
Citrus sinensis | scaffold00024 | 13 | CH_csi_41 | 6 | 13 | 0.00000000000240955 |
Glycine max | Gm18 | 13 | CH_gma_205 | 6 | 29 | 0.00000000142754 |
Gossypium raimondii | Chr03 | 13 | CH_gra_426 | 3 | 5 | 0.0000983955 |
Lotus japonicus | chr6 | 13 | CH_lja_204 | 3 | 6 | 0.000131213 |
Manihot esculenta | scaffold08265 | 13 | CH_mes_237 | 3 | 8 | 0.0000906745 |
Oryza sativa ssp. japonica | 11 | 13 | CH_osa_249 | 4 | 5 | 0.0000000101848 |
Oryza sativa ssp. japonica | 3 | 13 | CH_osa_724 | 3 | 8 | 0.000277617 |
Prunus persica | scaffold_2 | 13 | CH_ppe_260 | 5 | 11 | 0.0000000258975 |
Prunus persica | scaffold_7 | 13 | CH_ppe_14 | 14 | 25 | 9.32291e-32 |
Prunus persica | scaffold_7 | 14 | CH_ppe_14 | 14 | 25 | 9.32291e-32 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |