Functional clusters   top

Information

Type
InterPro domain
Identifier
IPR018040
Description
Pectinesterase, active site

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyratascaffold_613CH_aly_549340.000497524
Brassica rapaA0113CH_bra_383330.000292082
Capsella rubellascaffold_613CH_cru_460330.000229252
Citrullus lanatusChr113CH_cla_330330.000134109
Citrullus lanatusChr213CH_cla_452340.000535729
Citrus sinensisscaffold0001313CH_csi_141450.000000836924
Cucumis meloCM3.5_scaffold0000513CH_cme_315330.000116406
Eucalyptus grandisscaffold_613CH_egr_879330.00000906866
Fragaria vescaLG113CH_fve_2616380.000000496064
Fragaria vescaLG513CH_fve_463330.0000872092
Glycine maxGm0913CH_gma_3425110.00000050983
Glycine maxGm1513CH_gma_277580.0000000620762
Glycine maxGm1913CH_gma_685330.000342223
Gossypium raimondiiChr0913CH_gra_496330.000195947
Lotus japonicuschr113CH_lja_2415650.000205422
Manihot esculentascaffold1011413CH_mes_368330.000354521
Manihot esculentascaffold1030513CH_mes_141440.000000874944
Medicago truncatulachr113CH_mtr_325560.00000000122946
Medicago truncatulachr213CH_mtr_1145340.000537573
Medicago truncatulachr413CH_mtr_682470.00000583259
Medicago truncatulachr713CH_mtr_2996130.000000000423467
Medicago truncatulachr714CH_mtr_128101450.000000000337315
Physcomitrella patensscaffold_23613CH_ppa_162370.000929032
Populus trichocarpaChr0313CH_ptr_5514100.0000667481
Prunus persicascaffold_113CH_ppe_762340.000960584
Prunus persicascaffold_613CH_ppe_340440.000000476811
Prunus persicascaffold_713CH_ppe_3136230.000000174065
Ricinus communis3014713CH_rco_172440.000000385689
Solanum lycopersicumch0113CH_sly_546330.0000800665
Solanum lycopersicumch0213CH_sly_545330.0000800665
Solanum lycopersicumch0713CH_sly_544330.0000800665
Solanum tuberosumchr0113CH_stu_822330.0000895759
Solanum tuberosumchr0713CH_stu_823330.0000895759
Thellungiella parvulach6-113CH_tpa_237330.000153611
Vitis viniferachr1113CH_vvi_6524190.000659242
Vitis viniferachr1613CH_vvi_269440.000000173281
Vitis viniferachr613CH_vvi_316450.000000865328

Functional clusters experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1GOPrimary GO data only.230800.001X
2GOPrimary and orthology projected GO data.230800.001X
3GOAll GO data.230800.001X
4GOPrimary GO data only.101503000.001X
5GOPrimary and orthology projected GO data.101503000.001X
6GOAll GO data.101503000.001X
7GOPrimary GO data only.230800.001V
8GOPrimary and orthology projected GO data.230800.001V
9GOAll GO data.230800.001V
10GOPrimary GO data only.101503000.001V
11GOPrimary and orthology projected GO data.101503000.001V
12GOAll GO data.101503000.001V
13InterProNo filter applied.230800.001X
14InterProNo filter applied.101503000.001X
15InterProNo filter applied.230800.001V
16InterProNo filter applied.101503000.001V
17MapManNo filter applied.230800.001X
18MapManNo filter applied.101503000.001X
19MapManNo filter applied.230800.001V
20MapManNo filter applied.101503000.001V