Functional clusters   top

Information

Type
InterPro domain
Identifier
IPR017451
Description
F-box associated interaction domain

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopodascaffold0000713CH_atr_145440.0000000108357
Amborella trichopodascaffold0007113CH_atr_2624130.00000770521
Arabidopsis lyratascaffold_613CH_aly_542570.000428495
Arabidopsis lyratascaffold_114CH_aly_46161750.000237423
Beta vulgaris0185.scaffold0052513CH_bvu_426330.000431586
Beta vulgarisBvchr3.sca00513CH_bvu_243460.0000171193
Brassica rapaA0113CH_bra_496450.000851756
Brassica rapaA0313CH_bra_96660.0000000109791
Brassica rapaA0513CH_bra_3267290.000117035
Brassica rapaA0514CH_bra_27121510.000182823
Capsella rubellascaffold_213CH_cru_33011620.0000189405
Capsella rubellascaffold_813CH_cru_315550.00001213
Capsella rubellascaffold_214CH_cru_45161490.0000064913
Capsella rubellascaffold_314CH_cru_47202630.0000189475
Citrus sinensisscaffold0001713CH_csi_913172.18984e-25
Citrus sinensisscaffold0028613CH_csi_216460.0000414143
Citrus sinensisscaffold0001714CH_csi_813172.18984e-25
Eucalyptus grandisscaffold_813CH_egr_5226130.00000000284639
Eucalyptus grandisscaffold_813CH_egr_18313791.80461e-17
Eucalyptus grandisscaffold_913CH_egr_28511690.0000000000000333356
Eucalyptus grandisscaffold_814CH_egr_98212741.95378e-23
Eucalyptus grandisscaffold_914CH_egr_17011690.0000000000000333356
Fragaria vescaLG313CH_fve_4836150.00012579
Fragaria vescaLG313CH_fve_1949230.000000016938
Fragaria vescaLG313CH_fve_2067100.0000000302561
Fragaria vescaLG513CH_fve_1218100.000000000108929
Fragaria vescaLG613CH_fve_2409290.000000197172
Fragaria vescaLG613CH_fve_4108360.0000587344
Fragaria vescaLG613CH_fve_11911300.0000000000966387
Fragaria vescaLG613CH_fve_2767140.000000836755
Fragaria vescaLG613CH_fve_3114243.08795e-18
Fragaria vescaLG713CH_fve_497580.000154432
Fragaria vescascf051316013CH_fve_4826150.00012579
Fragaria vescascf051316013CH_fve_578440.000293932
Fragaria vescaLG314CH_fve_36201690.0000000000132829
Fragaria vescaLG614CH_fve_2614243.08795e-18
Fragaria vescaLG614CH_fve_3911300.0000000000966387
Fragaria vescaLG515CH_fve_20450.000121087
Glycine maxGm0613CH_gma_668330.00026648
Glycine maxGm0813CH_gma_542490.0000555346
Glycine maxGm1813CH_gma_2512202.16154e-24
Glycine maxGm1813CH_gma_335440.000000443706
Glycine maxGm1814CH_gma_2412202.16154e-24
Gossypium raimondiiChr0413CH_gra_2611113.62385e-26
Gossypium raimondiiChr1113CH_gra_9411690.0000000000000486135
Gossypium raimondiiChr0414CH_gra_2811113.62385e-26
Gossypium raimondiiChr1114CH_gra_5111690.0000000000000486135
Lotus japonicuschr113CH_lja_274330.00045778
Lotus japonicuschr513CH_lja_129450.00000552913
Lotus japonicuschr613CH_lja_67570.0000000553135
Lotus japonicuschr613CH_lja_102440.00000110798
Malus domestica913CH_mdo_1726270.000000897695
Manihot esculentascaffold0155113CH_mes_311330.000248968
Manihot esculentascaffold0415113CH_mes_23770.00000000000000494882
Medicago truncatulachr113CH_mtr_11376190.000464001
Medicago truncatulachr113CH_mtr_44412730.0000000587942
Medicago truncatulachr313CH_mtr_543680.000000516885
Medicago truncatulachr313CH_mtr_8376140.0000531712
Medicago truncatulachr313CH_mtr_23014620.00000000000650366
Medicago truncatulachr313CH_mtr_30812510.000000000597366
Medicago truncatulachr313CH_mtr_6616100.0000038231
Medicago truncatulachr413CH_mtr_8307240.0000463472
Medicago truncatulachr413CH_mtr_941580.000127056
Medicago truncatulachr513CH_mtr_6387170.00000273659
Medicago truncatulachr713CH_mtr_3957100.0000000177439
Medicago truncatulachr713CH_mtr_10139650.000208282
Medicago truncatulachr713CH_mtr_8366140.0000531712
Medicago truncatulachr713CH_mtr_9516160.000139833
Medicago truncatulachr114CH_mtr_14312730.0000000587942
Medicago truncatulachr214CH_mtr_16110610.00000487261
Medicago truncatulachr314CH_mtr_102201430.0000000000000141055
Medicago truncatulachr414CH_mtr_14611570.0000000826249
Medicago truncatulachr414CH_mtr_180131890.000448793
Medicago truncatulachr514CH_mtr_174111120.000156875
Oryza sativa ssp. japonica1213CH_osa_5854110.0000670661
Oryza sativa ssp. japonica313CH_osa_7584160.000367872
Oryza sativa ssp. japonica613CH_osa_512490.0000256629
Oryza sativa ssp. japonica713CH_osa_278590.0000000343738
Oryza sativa ssp. japonica713CH_osa_7234150.000276204
Oryza sativa ssp. japonica813CH_osa_422460.0000030651
Populus trichocarpaChr0613CH_ptr_2037190.00000000037631
Populus trichocarpaChr0813CH_ptr_699330.000408268
Prunus persicascaffold_113CH_ppe_726470.000649012
Prunus persicascaffold_113CH_ppe_441590.0000116529
Prunus persicascaffold_113CH_ppe_298550.0000000940462
Prunus persicascaffold_1513CH_ppe_15310310.0000000000107698
Prunus persicascaffold_313CH_ppe_2569420.0000000212663
Prunus persicascaffold_613CH_ppe_636460.000279277
Prunus persicascaffold_613CH_ppe_3778440.00000171545
Prunus persicascaffold_114CH_ppe_103111600.0000205333
Prunus persicascaffold_1514CH_ppe_6910310.0000000000107698
Prunus persicascaffold_314CH_ppe_118122400.000128249
Ricinus communis2972613CH_rco_371340.000345822
Solanum lycopersicumch0513CH_sly_814330.00098008
Solanum lycopersicumch0513CH_sly_428450.0000145859
Solanum lycopersicumch1113CH_sly_816330.00098008
Solanum lycopersicumch1113CH_sly_815330.00098008
Solanum tuberosumchr0113CH_stu_722580.0000445613
Solanum tuberosumchr0413CH_stu_7813163.48831e-21
Solanum tuberosumchr0413CH_stu_11285130.000992916
Solanum tuberosumchr0513CH_stu_31711460.00000000129954
Solanum tuberosumchr0513CH_stu_2469160.0000000000255799
Solanum tuberosumchr1113CH_stu_829440.000109523
Solanum tuberosumchr0114CH_stu_132152100.00000273487
Solanum tuberosumchr0414CH_stu_6813163.48831e-21
Solanum tuberosumchr0514CH_stu_11811460.00000000129954
Solanum tuberosumchr0514CH_stu_12611590.0000000250052
Theobroma cacaoscaffold_113CH_tca_5985310.000482141
Theobroma cacaoscaffold_10r13CH_tca_738140.000000000000120602
Theobroma cacaoscaffold_413CH_tca_77780.000000000000138019
Theobroma cacaoscaffold_513CH_tca_109660.00000000000724462
Theobroma cacaoscaffold_515CH_tca_2440.000000129035
Vitis viniferachr513CH_vvi_506370.000107952
Zea mays113CH_zma_208330.0000025799

Functional clusters experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1GOPrimary GO data only.230800.001X
2GOPrimary and orthology projected GO data.230800.001X
3GOAll GO data.230800.001X
4GOPrimary GO data only.101503000.001X
5GOPrimary and orthology projected GO data.101503000.001X
6GOAll GO data.101503000.001X
7GOPrimary GO data only.230800.001V
8GOPrimary and orthology projected GO data.230800.001V
9GOAll GO data.230800.001V
10GOPrimary GO data only.101503000.001V
11GOPrimary and orthology projected GO data.101503000.001V
12GOAll GO data.101503000.001V
13InterProNo filter applied.230800.001X
14InterProNo filter applied.101503000.001X
15InterProNo filter applied.230800.001V
16InterProNo filter applied.101503000.001V
17MapManNo filter applied.230800.001X
18MapManNo filter applied.101503000.001X
19MapManNo filter applied.230800.001V
20MapManNo filter applied.101503000.001V