Functional clusters
Information
- Type
- InterPro domain
- Identifier
- IPR015876
- Description
- Fatty acid desaturase, type 1, core
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Arabidopsis lyrata | scaffold_1 | 13 | CH_aly_130 | 5 | 34 | 0.000000000694869 |
Arabidopsis thaliana | 1 | 13 | CH_ath_72 | 6 | 34 | 0.00000000000190531 |
Brassica rapa | A03 | 13 | CH_bra_81 | 4 | 4 | 0.00000000112173 |
Brassica rapa | A08 | 13 | CH_bra_497 | 3 | 13 | 0.00085937 |
Brassica rapa | A09 | 13 | CH_bra_202 | 3 | 3 | 0.00000301394 |
Capsella rubella | scaffold_1 | 13 | CH_cru_214 | 3 | 3 | 0.000000305845 |
Citrullus lanatus | Chr7 | 13 | CH_cla_161 | 3 | 3 | 0.000000217339 |
Cucumis melo | CM3.5_scaffold00031 | 13 | CH_cme_22 | 8 | 12 | 1.18859e-21 |
Fragaria vesca | LG6 | 13 | CH_fve_164 | 5 | 21 | 0.00000000251621 |
Malus domestica | 17 | 13 | CH_mdo_138 | 3 | 3 | 0.000000178975 |
Populus trichocarpa | Chr11 | 13 | CH_ptr_282 | 3 | 5 | 0.0000000372027 |
Prunus persica | scaffold_3 | 13 | CH_ppe_235 | 4 | 4 | 0.00000000267474 |
Prunus persica | scaffold_4 | 13 | CH_ppe_107 | 6 | 9 | 0.000000000000045492 |
Thellungiella parvula | ch1-1 | 13 | CH_tpa_350 | 3 | 26 | 0.000858932 |
Thellungiella parvula | ch3-1 | 13 | CH_tpa_149 | 3 | 5 | 0.00000331463 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |