Functional clusters
Information
- Type
- InterPro domain
- Identifier
- IPR014025
- Description
- Glutaredoxin subgroup
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Arabidopsis lyrata | scaffold_5 | 13 | CH_aly_344 | 3 | 4 | 0.0000272554 |
Arabidopsis lyrata | scaffold_7 | 13 | CH_aly_52 | 6 | 6 | 8.75252e-16 |
Arabidopsis thaliana | 3 | 13 | CH_ath_312 | 3 | 4 | 0.0000118999 |
Arabidopsis thaliana | 4 | 13 | CH_ath_60 | 5 | 5 | 0.000000000000411226 |
Capsella rubella | scaffold_7 | 13 | CH_cru_28 | 8 | 11 | 9.87339e-20 |
Glycine max | Gm10 | 13 | CH_gma_107 | 5 | 5 | 0.0000000000013816 |
Gossypium raimondii | Chr11 | 13 | CH_gra_320 | 3 | 3 | 0.00000488156 |
Manihot esculenta | scaffold08265 | 13 | CH_mes_218 | 3 | 4 | 0.0000302543 |
Medicago truncatula | chr4 | 13 | CH_mtr_554 | 3 | 3 | 0.000000642363 |
Oryza sativa ssp. japonica | 11 | 13 | CH_osa_213 | 4 | 7 | 0.00000000157367 |
Populus trichocarpa | Chr08 | 13 | CH_ptr_480 | 3 | 4 | 0.0000144158 |
Solanum lycopersicum | ch04 | 13 | CH_sly_10 | 11 | 11 | 1.16555e-31 |
Solanum lycopersicum | ch04 | 14 | CH_sly_11 | 11 | 11 | 1.16555e-31 |
Thellungiella parvula | ch7-4 | 13 | CH_tpa_21 | 5 | 5 | 0.0000000000013069 |
Zea mays | 10 | 13 | CH_zma_205 | 3 | 4 | 0.00000250358 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |