Functional clusters
Information
- Type
- InterPro domain
- Identifier
- IPR012416
- Description
- Calmodulin binding protein-like
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Beta vulgaris | Bvchr4.sca002 | 13 | CH_bvu_149 | 4 | 8 | 0.0000000623256 |
Citrullus lanatus | Chr3 | 13 | CH_cla_21 | 9 | 21 | 1.30943e-20 |
Citrullus lanatus | Chr3 | 14 | CH_cla_14 | 10 | 51 | 0.00000000000000508447 |
Cucumis melo | CM3.5_scaffold00025 | 13 | CH_cme_31 | 8 | 21 | 1.26786e-18 |
Eucalyptus grandis | scaffold_1 | 13 | CH_egr_411 | 6 | 11 | 0.0000000000229991 |
Eucalyptus grandis | scaffold_5 | 13 | CH_egr_521 | 5 | 8 | 0.00000000281118 |
Eucalyptus grandis | scaffold_5 | 13 | CH_egr_196 | 8 | 13 | 5.77642e-17 |
Eucalyptus grandis | scaffold_5 | 13 | CH_egr_1213 | 3 | 5 | 0.000467211 |
Glycine max | Gm03 | 13 | CH_gma_387 | 3 | 3 | 0.00000198988 |
Medicago truncatula | chr6 | 13 | CH_mtr_525 | 3 | 3 | 0.000000403771 |
Medicago truncatula | chr7 | 13 | CH_mtr_604 | 3 | 4 | 0.00000161487 |
Oryza sativa ssp. japonica | 11 | 13 | CH_osa_91 | 8 | 52 | 0.00000000000000607153 |
Oryza sativa ssp. japonica | 12 | 13 | CH_osa_469 | 3 | 4 | 0.0000117613 |
Solanum lycopersicum | ch03 | 13 | CH_sly_67 | 6 | 7 | 9.04849e-17 |
Solanum tuberosum | chr03 | 13 | CH_stu_88 | 7 | 8 | 7.3637e-20 |
Vitis vinifera | chr17 | 13 | CH_vvi_306 | 3 | 3 | 0.000000712763 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |