Functional clusters
Information
- Type
- InterPro domain
- Identifier
- IPR011989
- Description
- Armadillo-like helical
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Citrullus lanatus | Chr5 | 13 | CH_cla_327 | 7 | 25 | 0.000108554 |
Citrullus lanatus | Chr7 | 13 | CH_cla_391 | 4 | 4 | 0.000257872 |
Cucumis melo | CM3.5_scaffold00042 | 13 | CH_cme_491 | 6 | 22 | 0.000879518 |
Eucalyptus grandis | scaffold_8 | 13 | CH_egr_216 | 10 | 11 | 4.42221e-16 |
Eucalyptus grandis | scaffold_8 | 14 | CH_egr_144 | 10 | 11 | 4.42221e-16 |
Gossypium raimondii | Chr05 | 13 | CH_gra_335 | 5 | 5 | 0.0000071464 |
Medicago truncatula | chr1 | 13 | CH_mtr_1058 | 7 | 48 | 0.000288773 |
Medicago truncatula | chr3 | 13 | CH_mtr_435 | 7 | 16 | 0.0000000514655 |
Solanum tuberosum | chr01 | 13 | CH_stu_131 | 10 | 11 | 8.31874e-16 |
Solanum tuberosum | chr01 | 13 | CH_stu_531 | 7 | 16 | 0.00000133429 |
Solanum tuberosum | chr01 | 14 | CH_stu_89 | 10 | 11 | 8.31874e-16 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |